Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac9g2333 ATGGCCACAGAAGAATTCTCCGAGTTCCGTAGTGCTTTTTTCCAATCGCAAACTTCGAACGGTCGAGCACGGCGGCGGATATGGGATGGATTTTGCTTCGGATTGATTATTCAAGGCTTTTTTGGCTTCTCTTCCGCCATTTTTCTTACGAAAATCACGACGGAAAGCCTCGCATTTAGTTCCTCCTCCCCCACCGCCGCCGCCGCCGCTTCCGCCGACTCCGCCGCCGCCGATTTAATACTTGTTAATACTCGAGCTGGGAATCCCAGCAGCAACCTTCACGATTGTCACTCGGAATTTGGGTACGTTGAGACCGATCCGACATGTCGTTACGGCCGTTTTGAAGAAGTTCTGGGAAAAGGGGCCATGAAAACAGTGTACAAAGCCATTGATGAGTTTCTTGGAATAGAGGTGGCGTGGAGCCAGGTGAAGCTCAACGAAGTCCTCCGATCGCCCGATGATTTACAGCGGCTGTATTCGGAGGTTCACCTACTTAGCACACTTAAGCATGAATCGATCATGCGATTCTACACCTCTTGGATCGATGTTGATCGCAAAACGTTCAACTTCATTACTGAACTGTTTACTTCTGGAACGCTCAGAGAATATGGGAAGAAATATAGGCAAGTCGATATCAGAGCCATTAAGAGCTGGGCGCGCCAGATCCTGCAGGGGCTCATTTATTTGCACGAACACGATCCTCCGATAATACACCGAGATTTGAAGTGTGATAATATCTTTGTAAATGGCCATCTTGGGCAAGTCAAGATTGGTGACTTGGGGCTTGCAGCTATACTCCATGGCTCCAGATCTGCTCATAGTGTTATAGGCACACCGGAGTTTATGGCGCCAGAATTATACGAGGAGAATTACAATGAGCTAGTTGATGTCTACTCGTTTGGCATGTGTGTTCTGGAGATGCTTACTGCTGAGTATCCGTACAGCGAGTGTTCTAATCCTGCACAGATATATAAGAAAGTCACGTCGGGGAAGTTGCCAGCAGCATTGTACAAGATTCAAGATGTGGAAGCGCAGAGATTTATTAAGAAATGCTTGGCACCGGTTTCAATGAGGGCGTCTGCGAAAGAACTGTTGCTTGATCCTTTTCTCATGATTGATGGAGATCGATCTTCCTCGAAGGAGAGGAGTCAAAAACAGAAGCCATTTCTAAATGCCAAAGAGATGGAAAACTTGCACTTGGGTGAAGGTTTAAGCAGGACGAACATGACGATCACGGGGAAGCTGAACCCCGAAGATGATACTCTCTTTCTCAGAGTTCAGATTGCAGATAAAGATGGCTCTCTTAGGAACATATACTTCCCCTTCGACATAATGAACGACACAGCATTAGATGTGGCGATGGAGATGGTGAAAGAGTTGGAAATCTCTGATTGGGAGCCATTCGAAATAGCAGACATGATCGAGGGAGAGATATCGGCTCTGGTTCCAAACTGGAATAGAAGTGAGTTATCCAACCATAGCCTCAGCTTCGGTTATGCAGAAGAAGATGATAATGCATCTCATCATACTTTCCGCTCGGTCTCCTCATCGTCCCAAGCAACTTTGGGTCTTGTCACCTCCCCAAGAACAAATCAAAACATATCAAATGGTTTTAGTTGGTTCCCAGATGATGCACTTGACGATAGCAGTTCGCAGTGTTCGTCGGCATCGGGAACATACTCCAACTTGAATTACATCAGCAACGATGAGTACGAGACCAATATGAGTTCGGTCCGAATAGATCAACACAACAACATCAATAAGATTCACAACTCCTCAAGATTTTGTCCCATTGAGAACCGCAAAAACAAGGATTTCTTGGCTGGACTTTTATACAAGCAGAGCCAATGTGCGGTAGGGCCATCTCAAGGAGCTGCCTCTAGTCGCAAAGACAAGAGGGGAATGGATGGCCGTAGATTAACAAGAAACAGATCACTAGTTGATGTACATAGCCAATTGCTTCATCGCTCGTTGGTCGAGGAAGTGAATAGAAGACGGTTATTCAAGACGGTTGGAGCGGTTGAAAGCATCGGTTTTCAAGCACCTTGTGAGGTTTCTTCCAGCAAAAGGGTCTCGAGTAGGCAACCGATCGGGAACCGCAGTAGCGATGTAGCGAGAACGAGGAGAAATGACGATATTAGGCTAGATGTTGGAAGGAGAACATGA 2166 46.45 MATEEFSEFRSAFFQSQTSNGRARRRIWDGFCFGLIIQGFFGFSSAIFLTKITTESLAFSSSSPTAAAAASADSAAADLILVNTRAGNPSSNLHDCHSEFGYVETDPTCRYGRFEEVLGKGAMKTVYKAIDEFLGIEVAWSQVKLNEVLRSPDDLQRLYSEVHLLSTLKHESIMRFYTSWIDVDRKTFNFITELFTSGTLREYGKKYRQVDIRAIKSWARQILQGLIYLHEHDPPIIHRDLKCDNIFVNGHLGQVKIGDLGLAAILHGSRSAHSVIGTPEFMAPELYEENYNELVDVYSFGMCVLEMLTAEYPYSECSNPAQIYKKVTSGKLPAALYKIQDVEAQRFIKKCLAPVSMRASAKELLLDPFLMIDGDRSSSKERSQKQKPFLNAKEMENLHLGEGLSRTNMTITGKLNPEDDTLFLRVQIADKDGSLRNIYFPFDIMNDTALDVAMEMVKELEISDWEPFEIADMIEGEISALVPNWNRSELSNHSLSFGYAEEDDNASHHTFRSVSSSSQATLGLVTSPRTNQNISNGFSWFPDDALDDSSSQCSSASGTYSNLNYISNDEYETNMSSVRIDQHNNINKIHNSSRFCPIENRKNKDFLAGLLYKQSQCAVGPSQGAASSRKDKRGMDGRRLTRNRSLVDVHSQLLHRSLVEEVNRRRLFKTVGAVESIGFQAPCEVSSSKRVSSRQPIGNRSSDVARTRRNDDIRLDVGRRT 721
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 42656667 42660373 + Lag0009820.1 Lac9g2333 621259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac9g2333 721 MobiDBLite consensus disorder prediction 704 721 - -
Lac9g2333 721 Gene3D Phosphorylase Kinase; domain 1 96 193 - -
Lac9g2333 721 ProSitePatterns Serine/Threonine protein kinases active-site signature. 236 248 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Lac9g2333 721 SMART serkin_6 112 370 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac9g2333 721 MobiDBLite consensus disorder prediction 688 703 - -
Lac9g2333 721 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 98 677 IPR050588 GO:0004674(PANTHER)|GO:0005737(PANTHER)|GO:0006468(PANTHER)|GO:0035556(PANTHER)
Lac9g2333 721 Pfam Protein kinase domain 115 369 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac9g2333 721 MobiDBLite consensus disorder prediction 620 641 - -
Lac9g2333 721 MobiDBLite consensus disorder prediction 688 721 - -
Lac9g2333 721 SUPERFAMILY Protein kinase-like (PK-like) 114 371 IPR011009 -
Lac9g2333 721 CDD STKc_WNK 110 370 - -
Lac9g2333 721 Gene3D Transferase(Phosphotransferase) domain 1 195 374 - -
Lac9g2333 721 FunFam Probable serine/threonine-protein kinase WNK1 97 193 - -
Lac9g2333 721 ProSiteProfiles Protein kinase domain profile. 112 370 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac9g2333 721 FunFam probable serine/threonine-protein kinase WNK9 195 375 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac1g1784 Lac-Chr1:39358698 Lac9g2333 Lac-Chr9:42656667 1.90E-171 dispersed
Lac6g2741 Lac-Chr6:45131437 Lac9g2333 Lac-Chr9:42656667 6.50E-126 dispersed
Lac7g0117 Lac-Chr7:935475 Lac9g2333 Lac-Chr9:42656667 1.20E-118 dispersed
Lac8g1174 Lac-Chr8:24998399 Lac9g2333 Lac-Chr9:42656667 2.70E-19 dispersed
Lac9g1971 Lac-Chr9:39452696 Lac9g2333 Lac-Chr9:42656667 8.80E-91 dispersed
Lac9g2333 Lac-Chr9:42656667 Lac2g0487 Lac-Chr2:3545490 1.40E-19 dispersed
Lac9g2333 Lac-Chr9:42656667 Lac12g2279 Lac-Chr12:39919600 1.50E-135 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
86453 PF00069 Pkinase 1.30E-46 CL0016 Lac PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac9g2333 K08867 - csv:101203757 1163.29