Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lac9g2357 | ATGGCTACCGAGGCGACTGAAGCCACGACTAAGTTTCAGAATTCGGATTTTCGCCTGGTTCCGTCGCCTCCAGATTTCCATCCCGAGATTGTTGTCTCAGCCCATGATGGTCTCCGGTTCTGGCAGTTCATGATTGCCGGTTCAATCGCAGGGTCTGTTGAGCATATGGCTATGTTTCCGGTTGATACTGTCAAGACCCATATGCAAGCCCTTGGTTCTTGTCCAATTAAATCTGTTGGTGTTCGACAAGCCCTTCGGTCGATTTTGAAGTCAGAGGGGCCTGCTGGTTTTTATCGTGGTATTGGTGCTATGGGTCTCGGAGCTGGACCTGCACATGCTGTGTATTTTACGGTTTACGAGAATTGTAAGAAGTTTTTCTCTGGTGGGGATCCTAATAATTCAATTGCCCACGCGGCATCTGGGGTCTGTGCAACGGTGGCGAGTGACGCTGTTCTTACACCCATGGATATGGTGAAGCAGAGGTTGCAGCTTAGTAATAGTCCTTACAAGGGAGTGTTGGATTGTGTCAAAAGGGTCCTTAGAGATGAGGGTTTTAAAGCATTTTACGCATCATATAGAACTACAGTGTTAATGAATGCTCCATTTACTGCTGTGCATTTTGCCACATATGAAGCTGCAAAGAGAGGTTTGATGGAGGTTTCGCCAGAGAGTGCAAATGACGAACAGTGGATTGTTCATGCGACGGCAGGAGCTGCTGCTGGAGCCTTGGCTGCACTTGTTACAACGCCGCTTGATGTGGTTAAGACTCAATTACAATGTCAGGGTGTATGTGGATGCGATAGATTCAAAAGTGGGTCGATCAGGGATGTCTTTCGGACGATACTCAAGAAGGATGGATATAGAGGGCTTATGAGAGGATGGGTTCCAAGGATGCTCTTTCATGCTCCTGCAGCAGCTATTTGCTGGTCGACGTATGAAGCGTTAAAATCCTTCTTCCAAGACCTCAACAGCAGCAGCGACAACTTGACCTGA | 993 | 47.73 | MATEATEATTKFQNSDFRLVPSPPDFHPEIVVSAHDGLRFWQFMIAGSIAGSVEHMAMFPVDTVKTHMQALGSCPIKSVGVRQALRSILKSEGPAGFYRGIGAMGLGAGPAHAVYFTVYENCKKFFSGGDPNNSIAHAASGVCATVASDAVLTPMDMVKQRLQLSNSPYKGVLDCVKRVLRDEGFKAFYASYRTTVLMNAPFTAVHFATYEAAKRGLMEVSPESANDEQWIVHATAGAAAGALAALVTTPLDVVKTQLQCQGVCGCDRFKSGSIRDVFRTILKKDGYRGLMRGWVPRMLFHAPAAAICWSTYEALKSFFQDLNSSSDNLT | 330 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 42820589 | 42823709 | - | Lag0009844.1 | Lac9g2357 | 621283 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lac9g2357 | 330 | Gene3D | Mitochondrial carrier domain | 18 | 166 | IPR023395 | - | |
Lac9g2357 | 330 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 38 | 125 | IPR018108 | - | |
Lac9g2357 | 330 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 228 | 318 | IPR018108 | - | |
Lac9g2357 | 330 | SUPERFAMILY | Mitochondrial carrier | 36 | 314 | IPR023395 | - | |
Lac9g2357 | 330 | FunFam | Mitochondrial carrier protein, expressed | 133 | 327 | - | - | |
Lac9g2357 | 330 | Pfam | Mitochondrial carrier protein | 38 | 128 | IPR018108 | - | |
Lac9g2357 | 330 | Pfam | Mitochondrial carrier protein | 132 | 219 | IPR018108 | - | |
Lac9g2357 | 330 | Pfam | Mitochondrial carrier protein | 228 | 321 | IPR018108 | - | |
Lac9g2357 | 330 | Gene3D | Mitochondrial carrier domain | 167 | 330 | IPR023395 | - | |
Lac9g2357 | 330 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 132 | 216 | IPR018108 | - | |
Lac9g2357 | 330 | PANTHER | MITOFERRIN-1-RELATED | 33 | 321 | - | GO:0015093(PANTHER)|GO:0031966(PANTHER)|GO:0048250(PANTHER) | |
Lac9g2357 | 330 | PRINTS | Mitochondrial carrier protein signature | 43 | 56 | IPR002067 | GO:0055085(InterPro) | |
Lac9g2357 | 330 | PRINTS | Mitochondrial carrier protein signature | 56 | 70 | IPR002067 | GO:0055085(InterPro) | |
Lac9g2357 | 330 | PRINTS | Mitochondrial carrier protein signature | 189 | 207 | IPR002067 | GO:0055085(InterPro) | |
Lac9g2357 | 330 | PRINTS | Mitochondrial carrier protein signature | 237 | 259 | IPR002067 | GO:0055085(InterPro) | |
Lac9g2357 | 330 | PRINTS | Mitochondrial carrier protein signature | 147 | 165 | IPR002067 | GO:0055085(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lac1g1832 | Lac-Chr1:40016443 | Lac9g2357 | Lac-Chr9:42820589 | 4.10E-130 | dispersed | |
Lac8g2759 | Lac-Chr8:44904718 | Lac9g2357 | Lac-Chr9:42820589 | 6.30E-29 | dispersed | |
Lac9g0431 | Lac-Chr9:8282428 | Lac9g2357 | Lac-Chr9:42820589 | 2.90E-20 | dispersed | |
Lac9g2357 | Lac-Chr9:42820589 | Lac1g1874 | Lac-Chr1:40463548 | 5.50E-16 | dispersed | |
Lac9g2357 | Lac-Chr9:42820589 | Lac4g3001 | Lac-Chr4:48277704 | 2.70E-23 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lac9g2357 | K15113 | - | csv:101215924 | 622.468 |