Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lac9g2413 ATGTATTTGATAGGAATTGCAAATGCTATCGACTTAGCAGATCGCTTTCTTCCAAAACTTCAGGCACTGAATTGCAAACCTCAGGTTGTAACGTATAGGGCTTATTCCAAGGATCAGATCCTCAAGATTCTCCAACAAAGGTTAATTGCATTGCCTTTCGTTGTCTTTCAACCGCTAGCTCTGGAGCTTTGTGCTAGAAAAGTTGCAGCTGTGTCTGGAGATATGAGAAAAGCTCTTTATGTTTGCAGTAATGCCATTGAATTGTTAGAGGTGGAACTCAAAGCATCCTCTAAGGAGCTGAACCATAACGACGGGAGTGAAGCTTCAACACCTGAGTTTGTAAAAAAACAAGAGCCTCAGATTGTGAGGTTGGACCATATGGCTGTTGCTTTATCCAAGGCTTTTAAATCACCAGCGGTGGAAACCATACAGTCTCTTCCTCAACATCAACAGATTATTTTATGCTCTGTTGTGAAACTCTTTCGTGGAGGGAAGAAGGATACAACAATAGGAGAGCTTAACAAATCATATTTAGATATATGCAAATCAACACACATCCCTCCGGTGGGAGCTTTCGAACTTTCAAATATGTGCACAGTGCTAAGCGATCAGGGGCTTCTCGTACTTGGCAAGTCTCGAGTCGATAAAACGAGGCGAGTGTTGTTGAAAGTTGATGAAGCCGATGTCGTGTTTGCATTACAGATGATGTCCTCACAAGATTCTGGCGATGGAGGCCCAAAAAATTATAAAATAAAAGCCCAGGCCCACAACAAAACAACAGCTGTCTGTCGACGGTCAAAGAGTCAAACTATTACCGGCGGTATATATAATCCCCACCGCCACTGCCCATCGTCGAAAAACTTCGGCGATTCGTTTCTCTGTTGGCGTTGGTGGCGTACTGTCGAAGCTACGCCGCTTGACGAAGGCGAATTCGGCGATTCGTTTCATCTGAAGCATCTTCTTTCACATTCTGACTTCCGAACCGAGTCCCGAGGCCATGGTTGCAGTTGCTCATCGGCGGAACTTTGGTGTATGATCCATCCCTGTGGACTTTCGCACTCTGTATTTTCAAAAGTTGCCTCCCAATGCTTGGTCTGGCCACTGTTTCATTCACGACCCTAA 1122 44.74 MYLIGIANAIDLADRFLPKLQALNCKPQVVTYRAYSKDQILKILQQRLIALPFVVFQPLALELCARKVAAVSGDMRKALYVCSNAIELLEVELKASSKELNHNDGSEASTPEFVKKQEPQIVRLDHMAVALSKAFKSPAVETIQSLPQHQQIILCSVVKLFRGGKKDTTIGELNKSYLDICKSTHIPPVGAFELSNMCTVLSDQGLLVLGKSRVDKTRRVLLKVDEADVVFALQMMSSQDSGDGGPKNYKIKAQAHNKTTAVCRRSKSQTITGGIYNPHRHCPSSKNFGDSFLCWRWWRTVEATPLDEGEFGDSFHLKHLLSHSDFRTESRGHGCSCSSAELWCMIHPCGLSHSVFSKVASQCLVWPLFHSRP 373
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
9 43218926 43225495 - Lag0009900.1 Lac9g2413 621339
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lac9g2413 373 Pfam CDC6, C terminal winged helix domain 141 232 IPR015163 -
Lac9g2413 373 CDD Cdc6_C 147 229 IPR015163 -
Lac9g2413 373 Gene3D - 144 236 IPR036388 -
Lac9g2413 373 Gene3D - 19 143 - -
Lac9g2413 373 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 92 IPR027417 -
Lac9g2413 373 PANTHER CELL DIVISION CONTROL PROTEIN 6-RELATED 3 234 IPR050311 GO:0003688(PANTHER)|GO:0005634(PANTHER)|GO:0033314(PANTHER)
Lac9g2413 373 Pfam Cdc6/ORC-like, ATPase lid domain 35 92 IPR054425 -
Lac9g2413 373 SMART Cdc6_C_2 154 233 IPR015163 -
Lac9g2413 373 SUPERFAMILY Winged helix DNA-binding domain 140 234 IPR036390 -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac12g1688 Lac-Chr12:32661963 Lac9g2413 Lac-Chr9:43218926 8.80E-49 dispersed
Lac7g0404 Lac-Chr7:3173995 Lac9g2413 Lac-Chr9:43218926 1.30E-24 dispersed
Lac9g2413 Lac-Chr9:43218926 Lac12g1517 Lac-Chr12:28163702 1.30E-13 dispersed
Lac9g2413 Lac-Chr9:43218926 Lac12g1686 Lac-Chr12:32647259 4.20E-52 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac9g2413 K02213 - csv:101205741 373.244