Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac9g2418 ATGCCGCCGCCCACCGCCGCCTCCTTCTCCAGCAAATTCCTCGCCCTTTTACTCCTCATCGTCCACGTCGGCTGCTTCCTTCTTTCCTCCGCCGCCGACCACCGCCGCCGCCACCGCCCTTCGCCGCCGAAGAAGCGCAACGAGTCCTCACCGACTCCGTCGTGTCTCAAGCCACACAAAGCCCTAACCTCTTCGTTTTCGTTTCTCAAACGAATCTTCTCTTCCAAAACGTGCAAAATGGCAATCGAAACCACTCGGCCGTCGACTCCGGCTCGATCGTCGCAGCACTCGATCGTCACGCTGATCCAGCCGGAGGTTTCTCTGCCGGCGGAGACTCCGAGCGCTAAGAATCCTCCGGATTCCGCTGAAACGTCACCGCAGGATTCCGACATCACGACGGCGGAGATCAACCAATTCTTCCCTCTCCGCAACGATATCTTCCCCTGCACCGCCTGCGGCGAGATTTTCCCCAAGCCTCAGTTGCTCGAACAGCATCAATCGGCGAAACACGCCGTGTCGGAGCTCGCCGATTCGGATTCCGGCAAGAACATCGTTCGGATCATCTTCGAAACCGGATGGACCAGTAGAGAAAAAAGCCCTAGAATCCTTCGAATCTTGAAAATCCACAACAGCCAAAAGATTCTCTCCAGATTCGAGGAGTACAGAGAGTCGGTGAAGGCCAAAGCGGCGCGAAACGGCGCCGTGAAGCGGCGGGACGAGCGGTGCATAGCCGACGGGAACGAGCTTCTGAGATTTCACTGTTCGACGTTCTTGTGCGATTTGGGGCAAAACGGTAATTCCAGCATCTGCGGGCAGCAATTTTGTAGTATTTGTGGGATCATAAAATCGGGATTCTCACACAAGTTGACGGAATTTCTTACGCTATCAAGTAGCTGGAGGGCACACGTGGCAATCCCTGACGACATCGAACAGGAGTTCAAGTTCATGAACGTGAAGCGGGCGATTTTGGTTTGCCGGGTCGTGGCGGGCCGGCTCGGGTCGGACACGAGGAACCGGAGAAGGACGGCGGCGGGTTTGACTCCGTCGTCGGCCGGAGTGGGAGTGGCGCCGGACGACGGTGGATGA 1086 57.18 MPPPTAASFSSKFLALLLLIVHVGCFLLSSAADHRRRHRPSPPKKRNESSPTPSCLKPHKALTSSFSFLKRIFSSKTCKMAIETTRPSTPARSSQHSIVTLIQPEVSLPAETPSAKNPPDSAETSPQDSDITTAEINQFFPLRNDIFPCTACGEIFPKPQLLEQHQSAKHAVSELADSDSGKNIVRIIFETGWTSREKSPRILRILKIHNSQKILSRFEEYRESVKAKAARNGAVKRRDERCIADGNELLRFHCSTFLCDLGQNGNSSICGQQFCSICGIIKSGFSHKLTEFLTLSSSWRAHVAIPDDIEQEFKFMNVKRAILVCRVVAGRLGSDTRNRRRTAAGLTPSSAGVGVAPDDGG 361
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 43246694 43247779 - Lag0009905.1 Lac9g2418 621344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac9g2418 361 ProSiteProfiles Zinc finger C2H2 type domain profile. 147 175 IPR013087 -
Lac9g2418 361 MobiDBLite consensus disorder prediction 109 131 - -
Lac9g2418 361 Gene3D - 171 354 - -
Lac9g2418 361 SUPERFAMILY ADP-ribosylation 173 331 - -
Lac9g2418 361 MobiDBLite consensus disorder prediction 33 58 - -
Lac9g2418 361 MobiDBLite consensus disorder prediction 117 131 - -
Lac9g2418 361 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 66 332 - -
Lac9g2418 361 ProSitePatterns Zinc finger C2H2 type domain signature. 149 170 IPR013087 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac8g1882 Lac-Chr8:37064246 Lac9g2418 Lac-Chr9:43246694 7.70E-42 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
24495 None None None None Lac TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac9g2418 - - - 0.0