Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac9g2460 ATGTTAATTCAGTTTCTGGCACAACTGCCTGATGGTCCACCCAAGCTACGCATTACTGGTATAGATCATCCTCTACCAGGATTTCGTCCAGCACAAAAGATTGACGAGTCAGGTCGTCGTTTGGCAAAATACTGTGAGCGCTTTAAAGTTCCTTTTCAATATCAAGCCATAGCATCACATGACTGGGAAACTATCAAAGTTGAGGACTTCAAGCTTGAGAGCAGTGATGTGCTTGTTGTGAACTGTTTCTACAGGTTTAACAACCTACTTGATGAAACTGTCGAAGAAAGTAGTCCAAGGGATGTTGTTCTGCGTTTAGTAAGGAAGATGAATCCAAACATATTTGTCCATTCTGTGGTTAATGGATCCTACAATGCCCCCTTCTTCATAACACGATTCAGGGAGGCACTCTTCCACTTCTCTGCATTATACGATGCTCTAGATGTTACTTTACCTCGTGAAAGTGACGAGAGGATGATGTTAGAGAGAGAGTTTATTGGACGCCAAATTATGAATGTAGTAGCATGTGAGGGTGTTCAGAGGGTTGAGAGGCCTGAAACCTATAAGCAGTGGCAGGTTCGGTGTATGAGAGCTGGTTTCAAGCAGCTTCCTTTGGACAAGGAGATTATGAACAAGTTCAGGAACAAGTTAAAATCCCATTACCACAAAGATTTTGTGCTCGATGAAGATGACGGTTGGATGCTTCAAGGATGGAAAGGCCGGATTGTCTATGGTTCTTGTTGTTGGGTGCCAGCATAG 759 43.21 MLIQFLAQLPDGPPKLRITGIDHPLPGFRPAQKIDESGRRLAKYCERFKVPFQYQAIASHDWETIKVEDFKLESSDVLVVNCFYRFNNLLDETVEESSPRDVVLRLVRKMNPNIFVHSVVNGSYNAPFFITRFREALFHFSALYDALDVTLPRESDERMMLEREFIGRQIMNVVACEGVQRVERPETYKQWQVRCMRAGFKQLPLDKEIMNKFRNKLKSHYHKDFVLDEDDGWMLQGWKGRIVYGSCCWVPA 252
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 43500780 43501538 - Lag0009947.1 Lac9g2460 621386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac9g2460 252 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 2 249 IPR005202 GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0006355(PANTHER)|GO:0043565(PANTHER)
Lac9g2460 252 ProSiteProfiles GRAS family profile. 1 250 IPR005202 -
Lac9g2460 252 Pfam GRAS domain family 2 249 IPR005202 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac9g1970 Lac-Chr9:39446838 Lac9g2460 Lac-Chr9:43500780 2.70E-36 dispersed
Lac10g3111 Lac-Chr10:45491599 Lac9g2460 Lac-Chr9:43500780 1.30E-92 wgd
Lac7g2743 Lac-Chr7:46582653 Lac9g2460 Lac-Chr9:43500780 2.80E-86 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
24498 PF03514 GRAS 6.10E-72 CL0063 Lac TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac9g2460 K27753 - csv:101203568 468.388