Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac9g2475 ATGGGTAACGGGATAGGGAAGCTCGGCGTTTGCTTCACCGGAATCGACGATGGACGGCGGCGGCCGGATATTTCCGTTCTGCTATCGAATCCACTCGATGAAGGGCTCGGGCACTCGTTCTGCTATGTCCGGCCGGATCCTTTGAGGCTTTCGTCTTCAAAAGTTCATTCGGAAGAAACCACCACTTTCCGATCAATTTCCGGCGCCTCTGTAAGTGCCAATACATCGACGCCTCTTTCTACGGCGCTTGTTGATCTGTATTCGTACAATAGCATTGATCGAGCGGCGGCTTTTGAGAGCTCGACTTCTTTCGCTTCAATCCCTTTGCAGCCGATCCCTAGAAATATGATAAATTCGGGTCCGATTTCGGGGAATTTCAGTGGAGTCCCGTGTTCGGGTCCTTTGGAAAGAGGGTTTTTATCGGGTCCAATTGAGCGAGGGTTTATGTCGGGTCCATTGGATCGGGGGATTTTTTCGGGTCCTCTTGATAATTCTTCATCCACTGAGTTTCAGAGAAGTTTCTCTCATGGAGGAGGGTTTAATTCCAGATCTAGATCGAGAAAAAGCCGGCTAATTCGGATTTTAAGAAGCGCAATTTCGAAGTCGATTTATCGAGGGCAAAATTCCATTGTGGCTCCGATTAAAGCGGTTAAAGAACCCGATTGGATCGTCATGCCCGAGAAGCATAATGAGAATTTGACTGTCAGTAGTTTGAATTTCAGTAGCGAGGGGAGTTTGGAGGACGATGATTCAATGGAGAGCCAAAATCTTCAGTGGGCTCAAGGAAAAGCAGGGGAAGATCGAGTTCATGTTGTTGTTTCTGAAGAACACGGGTGGGTTTTCGTAGGGATTTATGATGGATTCAACGGTCCTGATGCTCCTGATTATCTTTTGTCGAATTTGTACTCCTTTGTTCATAAAGAGCTCAAAGGTTTGTTATGGGACGAAAAGCTCGATTCGGCTGGAGTCGCCGCTCCGGCCACTTCCCCTGTTCGATCTGAGCATCCTTGTTTAGAAACAAGAGATTCTTCTCTGGTTAATGACAGTGATTTGGAGAGGAATCGGGTGAGTGATGCTTGTTCTCAGTGTGTTGAACAAGAGAATCATCCTTGTGCTAGTGGAGATGGGAATTCTGGATCGAATTCGAGGAGACGAAAAGGTAGGAATTCAAGAGGAAAGTTCAGAGGAGCTGCTGAGAAGTGGGAGGATAATCAGCGGCGGTGGAAGTGCGAATGGGACCGGGAACGGTTAGAACTCGATCGGAGGTTAAAGGAGCAGTTGAATCGATCGGGGTCGCACGGTTCGCGGTCGATTAATCATTCGGATGTTTTGAAAGCTCTATCCCAGGCATTGAAGAAAACAGAGGAGGCCTATTTGGATATTGCAGACAAGATGCTTGATGAAAATCCTGAACTGGCTTTGATGGGTTCTTGTGTGCTTGTGATGCTTATGAAGGGGGATGATGTTTATGTGATGAATGTTGGCGACAGCCGAGCTGTTTTAGCTCAGAAGGCGGAGCCCGATTATTGGCTCGGGAAGATTCGACAGGACTTGGAGAGGATCAATGAAGAGCCAGTTCATGACATTGAAGCATTAGATGGTGATAGAGCATTCACCTCCGCTAACCTTACTGCTTTTCAGCTTTCCATGGATCACAGTACCAGTGTTGATGAGGAAGTTCAGCGAATAAAAAGTGAACACCCTGATGATGCTGGTGCCGTGATGAATGACCGTGTGAAGGGCTCGTTGAAGGTTACTCGGGCGTTCGGTGCTGGTTTCCTCAAACAGCCTAAATGGAACAATGCGCTATTGGAGATGTTCAGAATCGACTACGTCGGGCGATCGCCATACATCAATTGTCTTCCATCTCTCTACCACCACAGATTGGGACCAAAAGACAGGTTTTTGATACTATCATCTGATGGACTCTACCAGTACTTCACAAACGAAGAAGCTGTTTCTGAAGTTGAACTTTTCATCACATTGCAACCCGAAGGAGATCCGGCTCAACATCTGGTTGAACTCCTGCTGTTTCGGGCTGCGAAGCGAGCTGGTATGGATTTCCACGAGTTACTCGAAATACCGCAGGGCGACCGGAGGAAGTACCACGACGATGTATCGATCATTGTAATTTCATTAGAAGGGAGGATCTGGAGATCCTGTGTATAA 2169 47.35 MGNGIGKLGVCFTGIDDGRRRPDISVLLSNPLDEGLGHSFCYVRPDPLRLSSSKVHSEETTTFRSISGASVSANTSTPLSTALVDLYSYNSIDRAAAFESSTSFASIPLQPIPRNMINSGPISGNFSGVPCSGPLERGFLSGPIERGFMSGPLDRGIFSGPLDNSSSTEFQRSFSHGGGFNSRSRSRKSRLIRILRSAISKSIYRGQNSIVAPIKAVKEPDWIVMPEKHNENLTVSSLNFSSEGSLEDDDSMESQNLQWAQGKAGEDRVHVVVSEEHGWVFVGIYDGFNGPDAPDYLLSNLYSFVHKELKGLLWDEKLDSAGVAAPATSPVRSEHPCLETRDSSLVNDSDLERNRVSDACSQCVEQENHPCASGDGNSGSNSRRRKGRNSRGKFRGAAEKWEDNQRRWKCEWDRERLELDRRLKEQLNRSGSHGSRSINHSDVLKALSQALKKTEEAYLDIADKMLDENPELALMGSCVLVMLMKGDDVYVMNVGDSRAVLAQKAEPDYWLGKIRQDLERINEEPVHDIEALDGDRAFTSANLTAFQLSMDHSTSVDEEVQRIKSEHPDDAGAVMNDRVKGSLKVTRAFGAGFLKQPKWNNALLEMFRIDYVGRSPYINCLPSLYHHRLGPKDRFLILSSDGLYQYFTNEEAVSEVELFITLQPEGDPAQHLVELLLFRAAKRAGMDFHELLEIPQGDRRKYHDDVSIIVISLEGRIWRSCV 722
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 43607935 43610889 + Lag0009962.1 Lac9g2475 621401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac9g2475 722 Coils Coil 444 464 - -
Lac9g2475 722 ProSiteProfiles PPM-type phosphatase domain profile. 249 713 IPR001932 -
Lac9g2475 722 MobiDBLite consensus disorder prediction 325 344 - -
Lac9g2475 722 Gene3D - 226 718 IPR036457 -
Lac9g2475 722 PANTHER PROTEIN PHOSPHATASE 2C 239 713 IPR015655 GO:0004722(InterPro)|GO:0006470(PANTHER)|GO:0006470(InterPro)
Lac9g2475 722 SUPERFAMILY PP2C-like 263 714 IPR036457 -
Lac9g2475 722 MobiDBLite consensus disorder prediction 366 380 - -
Lac9g2475 722 MobiDBLite consensus disorder prediction 366 398 - -
Lac9g2475 722 CDD PP2Cc 439 713 IPR001932 -
Lac9g2475 722 SMART PP2C_4 250 711 IPR001932 -
Lac9g2475 722 Pfam Protein phosphatase 2C 446 506 IPR001932 -
Lac9g2475 722 Pfam Protein phosphatase 2C 542 663 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac7g0877 Lac-Chr7:7201844 Lac9g2475 Lac-Chr9:43607935 1.50E-60 dispersed
Lac5g0280 Lac-Chr5:2730965 Lac9g2475 Lac-Chr9:43607935 4.40E-122 transposed
Lac1g2045 Lac-Chr1:41990204 Lac9g2475 Lac-Chr9:43607935 9.90E-180 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac9g2475 - - - 0.0