Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac9g2512 ATGAGGAGTGTGTTCTTCGGATCTCCAACTCCTTCTTCAACACCGAGCACGCCGTCGTCGTCTCACTCGTCTCGCCCCACTCTATCGGATTCAATGGTGGATGAGAGTATCGAAGTTGCAGAATCGTTTGTGGCGAGGTGGAGAACTGATTCCGCCACTGCTGGTTCTCTGTTTCAAGGGGACGACCGTGATGAAGCTCAGCAGTTTATCAGAGCGGTTAAGAATTTGCATGCTGCCATGCACTGCCTTGCTTCTCAGGATTCTTCATCGGAGAGGCTTGTGCGTGCTCATGATTTGATGAGGATTGCCATGGAGAGGCTTCAGAGAGAGTTTTACCAGATTTTGTCTGCGAATCGGGAGTATCTGTATCCGGAATCGGTTTCCAGCGTTCAATCGCCGATGACGGTTTCGGCTAGATCGAGTGTTTCGGATTTTGAAGTGGAATCGGAGGATGAGTTCCGATTTGCTAACGAATCTATTGCTGAGGTCGAGCGAGTTTCGATCTCTGCCATGGCGGATTTGAAGGCAATTGCGGATATTATGATCTCCACCGGCTACGGCAAAGAATGCGTGAAGATTTATAAAATTGTTAGGAAATCAATTATTGACGAGAGTCTCTACAATCTTGGGATTGAGAAATTGAGTTTCTCGAAAGTTCAGAAGATGGATTGGGAGGTTCTTGAGATCAAAATCAAAACCTGGTTGAAAGGTGTGAAAACCGCAGTGAAATCTCTGTTCGAAGGAGAGAGAATCCTTTGCGATCACGTTTTCTCGGCTTCCGTTCCCATCAGAGAATCGTGCTTCGCTCAAATTTCCAAGGACGGAGCGATGATTCTGTTTGGATTCCCAGAATTGGTAGCAAAATACAAAAAAACTCCCGAGAAAATTTTCATTACACTGGACCTATACGAAGCCATAGCCGACCTCTGGCCGGAGATCAATTACATTTTCTCATCCACAGCATCATCAATGGTACAATCACAAGCCGTCAGTTCACTAATCAAACTCGGAGAGAACATTCGCGCATTAATCACCGACTTCGAAATGGCTATTCAAAAAGAATCATCGAAAACGCCTGTTCCTAGCGGCGGAGTTCATCCACTCACTCGCTACGTGATGAACTACATTTCGTTCCTCTCCGATTACAGTGGAATACTCAACGACATTATGGCCGATTGGCCTTTAGCAACAAAATTACCGATGCCAGAATCATACTACGGAACGCCAAAAGAAGATGATAGTCCGATTACCTTACGTTTCGCTTGGCTGATCCTCGTCCTCCTCTGCAAACTCGACGGCAAAGCAGAGCATTACAACGACGTCGCTCTCTCGTACTTGTTCTTGGCAAACAATCTCCGGTACGTCGTCGACAAAGTTCGCAACTCGAATATGAGATTCCTCCTCGGCGGCGAGTGGATTGAGAGGCACGAATCGAAGATCGAACTCTACTCCTCCAAGTACAGACGCATTGGATGGAGTGGAGTGTTCTCGTCGCTGCCGGCGAACGTCAAGGCGGAGATATCGCCGGAGGAAGCAAGAGAATCGTTCAGAAATTTCAAGAGAGCATTTGAAGAAACTTACAGAAAACAAACCTCCTGGATCGTGCCCGATCAGAAGCTTCGCGATGAAATAAGAATCTCGTTGGCGAAGGAGCTTGGGGCTTTATACGGCGAGTTTTACGCGAGGAATCGGGTTCGCGCGAGGCGGGTTTCTGGGTCGGATCCGGTGGTCCAATTGTCCCCTGATGATTTGGGTAACTATTTATCGGATTTGTTCTACGGGTCTGGATCCGGAAGTGTGAGCGGGTCCTCGTCCCATTCCTCGCCGTCTTCTCGAGGGAGATTCGCCCGTTGA 1854 48.0 MRSVFFGSPTPSSTPSTPSSSHSSRPTLSDSMVDESIEVAESFVARWRTDSATAGSLFQGDDRDEAQQFIRAVKNLHAAMHCLASQDSSSERLVRAHDLMRIAMERLQREFYQILSANREYLYPESVSSVQSPMTVSARSSVSDFEVESEDEFRFANESIAEVERVSISAMADLKAIADIMISTGYGKECVKIYKIVRKSIIDESLYNLGIEKLSFSKVQKMDWEVLEIKIKTWLKGVKTAVKSLFEGERILCDHVFSASVPIRESCFAQISKDGAMILFGFPELVAKYKKTPEKIFITLDLYEAIADLWPEINYIFSSTASSMVQSQAVSSLIKLGENIRALITDFEMAIQKESSKTPVPSGGVHPLTRYVMNYISFLSDYSGILNDIMADWPLATKLPMPESYYGTPKEDDSPITLRFAWLILVLLCKLDGKAEHYNDVALSYLFLANNLRYVVDKVRNSNMRFLLGGEWIERHESKIELYSSKYRRIGWSGVFSSLPANVKAEISPEEARESFRNFKRAFEETYRKQTSWIVPDQKLRDEIRISLAKELGALYGEFYARNRVRARRVSGSDPVVQLSPDDLGNYLSDLFYGSGSGSVSGSSSHSSPSSRGRFAR 617
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 43821538 43823391 + Lag0009999.1 Lac9g2512 621438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac9g2512 617 MobiDBLite consensus disorder prediction 1 31 - -
Lac9g2512 617 MobiDBLite consensus disorder prediction 596 617 - -
Lac9g2512 617 FunFam Exocyst subunit Exo70 family protein 52 600 - -
Lac9g2512 617 Pfam Exo70 exocyst complex subunit C-terminal 232 590 IPR046364 GO:0000145(InterPro)|GO:0005546(InterPro)|GO:0006887(InterPro)
Lac9g2512 617 SUPERFAMILY Cullin repeat-like 55 592 IPR016159 -
Lac9g2512 617 Gene3D Exocyst complex component Exo70 44 599 - -
Lac9g2512 617 Pfam Exocyst complex component Exo70 N-terminal 37 116 - -
Lac9g2512 617 PANTHER EXOCYST COMPLEX PROTEIN EXO70 30 594 IPR004140 GO:0000145(InterPro)|GO:0000145(PANTHER)|GO:0006887(PANTHER)|GO:0006887(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac13g0853 Lac-Chr13:6913197 Lac9g2512 Lac-Chr9:43821538 1.20E-141 dispersed
Lac8g1970 Lac-Chr8:38146116 Lac9g2512 Lac-Chr9:43821538 3.80E-70 dispersed
Lac3g1916 Lac-Chr3:21554657 Lac9g2512 Lac-Chr9:43821538 1.80E-180 transposed
Lac7g2631 Lac-Chr7:44955296 Lac9g2512 Lac-Chr9:43821538 3.50E-110 transposed
Lac7g2632 Lac-Chr7:44956576 Lac9g2512 Lac-Chr9:43821538 2.20E-60 transposed
Lac1g2070 Lac-Chr1:42231880 Lac9g2512 Lac-Chr9:43821538 1.80E-121 wgd
Lac10g3074 Lac-Chr10:45202775 Lac9g2512 Lac-Chr9:43821538 2.50E-174 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac9g2512 K07195 - csv:101212978 1007.67