Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac9g2543 ATGCACATCTCGACTAATCTCATGAGACAATCGTCTGATCCTACTACATTTTGGTTGACAAGAAAACACGTGTATATAGTGTATTTAGGCCACAACCGTTTGAGTGATGCTACTTCGACTTCCAAATACCATCTTCGTCTACTCTCTAAAGTATTTTCAAGTGAGGAAGATGGTAAAAGAGCCATGTTGTATAGCTACAAACACAGTTTTTCAGGATTCTCAGCCAAACTTAATGCAAGCCAGGCAATGGCATTATCAAAGATGGAAGCAGTGATATCTGTATTTGAGAGTAAAACGCTGCAACTCCACACAACAAGAAGTTGGGACTTCTTGGGCCTTCCCATTCCTTTGTATACTACTACTACTCCAGCTCCACTCCAACTTCAGCTTGCCTATGGCCATGACGTTGTTGTTGGCATCTTCGATTCAGGCGTGTGGCCGGAATCCGAAAGTTTCGAAGAGGGTGAAGTAGCGTGGATTGGTCCAATTCCATGTAGTTGGAAGGGAAGATGCGTGAAAGCATACAGATTCAACCCCGCAATAGCTTGCAATCGGAAGCTAATTGGTGCTCGCTACTATGTAAAAGGCTTCGAAGCCCAATATGGCGCGCTCAACCAGAGCGGGAACCCAGAGTTCCCGTCACCTCGAGACTTTTTAGGGCACGGAACTCACACGGCTTCCACAGCCGTGGGTGCCATTGTGGCGAACGTGAGCTTCACGGGCTCGTCGCTTGGCAAAGGAATTGCTCGAGGCGGAGCCCCAAGGGCTCGGCTGGCAGTGTACAAGGTCTGTTGGGGCAAGGACTACGAAGGGAAGTGCACAGATGCGGACGTGATGGCTGCTTTTGATGACGCTTTGCGAGACGGCGTGCACGTGATCTCTGCGTCTTTTGGAGGGACGCCGCCGTTGGCGCCGCTTTTTGAGTCCAGCTCTGCCATTGGCTCGTTCCATGCTATGCAGCAGGGAGTGAGCGTGGTGTTCTCGGCTGGCAATGATGGACCCGAACCCTCCCTCGTCCAAAATGTGTCTCCATGGAGCATTTGTGTTGCTGCATCAACTACTGATCGAACCTTTCCCACTCGAATACTTATCCAGAATCGCTTCTCCGTCGTGGGCGAGAGCTTGATCACTACGAACATAATTAACGCAAAACTAGCGGATGCAGTCAACTACTTCACAGATGGAATTTGCGAGCGAGAGAGTATAAGGAAAGGTGGAAAATCGGGTGCAGGGAAAGTGGTGGTTTGTTTCTCCACAATTGGCCCAGTTTCCATAGGGATTGCACAAGAAGCGGCGAAGGCCATTAATGCATCTGCTTTAATATTTGCTGCGCCCCCGACGACGCAGCTCCCCGACCTAGATCTCATCCCCACCGTTCTAATTGACATTACTCATGCAACTCAAATTAGAAACTTTCTTGCTGAGTTGCCCAGATTGCCAACAGTAGAGATAGGAGTTGGAAGAAGTGTGATCAGGAAATCAGCAGCTCCAAGTGTGGCTTACTTCTCGTCCAGAGGACCAAGCTCAATTTCACCTGACATTCTCAAGCCAGACATAAGTGCCCCAGGAGTGAACATATTGGCGGCATGGCCTCCAGAAACTGCTCCAACAGTGAAGCCAAGTTGGAGGGAAAGAGGAAGCGATGGACAAGTGAAATGGAATTTTCAATCAGGGACTTCAATGTCATGCCCTCACATCTCTGGAGTTGTGGCCCTCATTAAATCTCTGCATCCTAATTGGTCACCTGCAGCTATTAGATCTGCTATCATCACCACAGCCACCAAGAGGGACACCACTCGCGATACGATCCTAGCAGGTGGATCCATGAAAGCATCTGATCCATTTGACATTGGTGCTGGCCAAGTCAATCCTTTGAAGGCAATGGATCCAGGACTAGTCTACGACATCACAACTAATGATTATATCATTTTCCTTTGCAACATTGGCTACACAGAGCAGCAAATTAGGATGCTTCTAAACCCTTCTCCTCAAACACTTGTTTGTTGTCCACCATTTCTATCAACCTCTATTGCCAATCTTAATTATCCTTCCATTACACTTGCAAATCTCCACTCCATCACCACAATCAAAAGGACCGTTCGCAATGTAGCATCAAATAAGAATGCCATCTACTTTCTTAAAGTGCTTCCTCCTAATGGAGTGCAAGTACAAGTGTGGCCTAGAATTCTACTTTTCTCTTGGTTTAGGCAACAAATTTCTTACTATGTTACCGTAACTCCGCTCAAGAGGTCTCGAGGTAGATATGATTTTGGAGAGATTGAATGGTCGAATGGGTTCCATAGTGTCACAAGTCCTTTGGTTGTACGTGTTAGTAGTGCTAGTGTGTAA 2349 47.34 MHISTNLMRQSSDPTTFWLTRKHVYIVYLGHNRLSDATSTSKYHLRLLSKVFSSEEDGKRAMLYSYKHSFSGFSAKLNASQAMALSKMEAVISVFESKTLQLHTTRSWDFLGLPIPLYTTTTPAPLQLQLAYGHDVVVGIFDSGVWPESESFEEGEVAWIGPIPCSWKGRCVKAYRFNPAIACNRKLIGARYYVKGFEAQYGALNQSGNPEFPSPRDFLGHGTHTASTAVGAIVANVSFTGSSLGKGIARGGAPRARLAVYKVCWGKDYEGKCTDADVMAAFDDALRDGVHVISASFGGTPPLAPLFESSSAIGSFHAMQQGVSVVFSAGNDGPEPSLVQNVSPWSICVAASTTDRTFPTRILIQNRFSVVGESLITTNIINAKLADAVNYFTDGICERESIRKGGKSGAGKVVVCFSTIGPVSIGIAQEAAKAINASALIFAAPPTTQLPDLDLIPTVLIDITHATQIRNFLAELPRLPTVEIGVGRSVIRKSAAPSVAYFSSRGPSSISPDILKPDISAPGVNILAAWPPETAPTVKPSWRERGSDGQVKWNFQSGTSMSCPHISGVVALIKSLHPNWSPAAIRSAIITTATKRDTTRDTILAGGSMKASDPFDIGAGQVNPLKAMDPGLVYDITTNDYIIFLCNIGYTEQQIRMLLNPSPQTLVCCPPFLSTSIANLNYPSITLANLHSITTIKRTVRNVASNKNAIYFLKVLPPNGVQVQVWPRILLFSWFRQQISYYVTVTPLKRSRGRYDFGEIEWSNGFHSVTSPLVVRVSSASV 782
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 44095565 44102096 + Lag0010030.1 Lac9g2543 621469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac9g2543 782 FunFam Subtilisin-like protease SBT1.5 135 390 - -
Lac9g2543 782 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 17 103 IPR037045 -
Lac9g2543 782 Gene3D - 355 491 - -
Lac9g2543 782 Pfam Fibronectin type-III domain 679 775 IPR041469 -
Lac9g2543 782 Pfam Subtilase family 133 597 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Lac9g2543 782 FunFam Subtilisin-like protease SBT5.3 17 103 - -
Lac9g2543 782 Pfam Peptidase inhibitor I9 24 103 IPR010259 -
Lac9g2543 782 CDD PA_subtilisin_like 366 484 - -
Lac9g2543 782 ProSitePatterns Serine proteases, subtilase family, serine active site. 558 568 IPR023828 -
Lac9g2543 782 SUPERFAMILY Subtilisin-like 102 632 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Lac9g2543 782 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 25 773 IPR045051 -
Lac9g2543 782 ProSiteProfiles Serine proteases, subtilase domain profile. 107 628 - -
Lac9g2543 782 PRINTS Subtilisin serine protease family (S8) signature 133 152 IPR015500 -
Lac9g2543 782 PRINTS Subtilisin serine protease family (S8) signature 557 573 IPR015500 -
Lac9g2543 782 PRINTS Subtilisin serine protease family (S8) signature 217 230 IPR015500 -
Lac9g2543 782 CDD Peptidases_S8_3 100 594 IPR034197 -
Lac9g2543 782 Gene3D Peptidase S8/S53 domain 135 641 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Lac9g2543 782 Gene3D - 645 778 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac5g3083 Lac-Chr5:48529492 Lac9g2543 Lac-Chr9:44095565 1.10E-142 dispersed
Lac9g1818 Lac-Chr9:37984925 Lac9g2543 Lac-Chr9:44095565 8.20E-119 dispersed
Lac9g2543 Lac-Chr9:44095565 Lac9g2791 Lac-Chr9:46030222 4.00E-113 dispersed
Lac9g2543 Lac-Chr9:44095565 Lac4g3028 Lac-Chr4:48453912 2.90E-124 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac9g2543 - - - 0.0