Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac9g2570 ATGGCCGGAGGTGGCGCCGGAAGGTCCTTGGAAGAGACGCCGACGTGGGCCGTCGCCGTCGTCTGTTTTGTTTTGGTTTTGATTTCTATTATCATCGAACACATTCTTCATCTCATCGGAAAGTGGCTGAAGAAGAAGCACAAACGAGCTCTTTACGAAGCGCTCGAGAAAATCAAATCAGAGCTGATGCTGCTGGGGTTCATATCGCTGCTGCTGACTGTGGGACAGAGCTTAATCACCAATATTTGTATACCTCCAGAAGTGGCTGCCACGTGGCATCCATGCAGCCCTCAGAAAGAGCTGGAACTGACGACCAAACAAGATGACCTGGTCGACTCCGACAAAAATCGCCGGAAACTTCTCGCCGTCTCCCCTGCCAATGCCACTTTCCGCCGTGTCCTCGCCGCCGCCGGTGGAACCGACAAATGTGCTGAGAAGGGTAAAGTTCCATTTGTTTCGGAAGGAGGAATTCATCAGCTACATATATTCATTTTCGTGTTGGCTGTTTTCCATGTTCTTTACTGTGTCTTAACTTTAGCTTTGGGCAATGCTAAGATGAGAAGTTGGAAGTCGTGGGAAAAGGAAACCAGAACCGTGGAGTACCAATTCTCACATGATCCAGAACGATTTCGATTTGCAAGAGATACATCATTCGGGAGAAGACATTTGAGCTTTTGGACGAAATCGCCCTTCTTAATTTGGATTGTTTGTTTCTTCAGACAATTCGTTAGGTCGGTTCCTAAGGTTGATTACTTGACTTTAAGACATGGTTTCGTCATGGCTCATCTGGCACCGCACAGCGATCAGAAATTTGACTTCCAAAAGTACATCAAACGCTCACTGGAAGAAGATTTCAAGGTCGTCGTTAGTATCAGCCCTCCCATCTGGTTCTTCGCTGTCCTCTTCCTACTTTTCAACACCCACGGGTGGAGGGCTTATCTATGGCTGCCGTTTGTCCCATTAATCATTGTATTATTGGTGGGGACGAAATTGCAAGTAATAATAACGAAAATGGCGGTGAGGATTCAAGAAAGAGGAGAGGTGGTGAAGGGAGTGCCAGTGGTAGAGCCAGGGGATGACCTTTTCTGGTTCAATCGCCCTCGTCTCATTCTTTATCTCATCAACTTTGTGCTCTTTCAAAATGCGTTTCAGCTTGCTTTCTTTGCTTGGACTTGGAAAGAATTTGGGATGAAATCTTGTTTCCACGAACACACAGAGGATCTCGTGATAAGAATAACAATGGGAGTCCTCGTTCAAATCCTCTGCAGTTACGTTACACTGCCTCTCTACGCTCTAGTCACGCAGATGGGTTCGACAATGAAGCCGACAATTTTCAACGAAAGAGTAGCAACGGCGTTGAGAAACTGGCACCACACGGCTCGCAAACACATTAAGCAAAATCGGGGGTCGGTGACGCCGATGTCGAGCCGGCCGGCGACGCCGTCGCACCACATGTCGCCGGTGCACCTCCTCCGCCACTACCGGAGCGAATTGGACAGTGTCCACACCTCTCCCAGAAGGTCCAATTTCGACAACGACCAGTGGGACCCGGACTCCCCGTCGCCGTCGCACCACTTCCACCGCCACCCCCACGGCGGCGACGGCTCCAGCTCCTACAGCCACCACCACCCCCGCGACGTGGAGGCCGTCGATTTCGACGCCGATAGGGATTCTCTCCAACCCGACCCGACCCCGGCCCCGGATCCGGATGTTCAACGGACGAATGTTAATTCGGATCAGCATGAGATTGATGTGGGCCCGAAGGAATTCTCGTTTGATAGAAGAGTTGATAGAGTATGA 1800 50.28 MAGGGAGRSLEETPTWAVAVVCFVLVLISIIIEHILHLIGKWLKKKHKRALYEALEKIKSELMLLGFISLLLTVGQSLITNICIPPEVAATWHPCSPQKELELTTKQDDLVDSDKNRRKLLAVSPANATFRRVLAAAGGTDKCAEKGKVPFVSEGGIHQLHIFIFVLAVFHVLYCVLTLALGNAKMRSWKSWEKETRTVEYQFSHDPERFRFARDTSFGRRHLSFWTKSPFLIWIVCFFRQFVRSVPKVDYLTLRHGFVMAHLAPHSDQKFDFQKYIKRSLEEDFKVVVSISPPIWFFAVLFLLFNTHGWRAYLWLPFVPLIIVLLVGTKLQVIITKMAVRIQERGEVVKGVPVVEPGDDLFWFNRPRLILYLINFVLFQNAFQLAFFAWTWKEFGMKSCFHEHTEDLVIRITMGVLVQILCSYVTLPLYALVTQMGSTMKPTIFNERVATALRNWHHTARKHIKQNRGSVTPMSSRPATPSHHMSPVHLLRHYRSELDSVHTSPRRSNFDNDQWDPDSPSPSHHFHRHPHGGDGSSSYSHHHPRDVEAVDFDADRDSLQPDPTPAPDPDVQRTNVNSDQHEIDVGPKEFSFDRRVDRV 599
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 44311303 44315541 + Lag0010057.1 Lac9g2570 621496

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Lac9g2570 599 MobiDBLite consensus disorder prediction 499 558 - -
Lac9g2570 599 PANTHER MLO-LIKE PROTEIN 1 2 528 IPR004326 GO:0006952(InterPro)|GO:0016020(InterPro)
Lac9g2570 599 Pfam Mlo family 7 494 IPR004326 GO:0006952(InterPro)|GO:0016020(InterPro)
Lac9g2570 599 MobiDBLite consensus disorder prediction 461 485 - -
Lac9g2570 599 MobiDBLite consensus disorder prediction 466 482 - -
Lac9g2570 599 MobiDBLite consensus disorder prediction 499 599 - -
Lac9g2570 599 MobiDBLite consensus disorder prediction 582 599 - -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac9g2570 K08472 - - csv:101212018 1039.25
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac1g3099 Lac-Chr1:51445935 Lac9g2570 Lac-Chr9:44311303 1.90E-139 dispersed
Lac1g3367 Lac-Chr1:53284899 Lac9g2570 Lac-Chr9:44311303 1.70E-115 dispersed
Lac6g0081 Lac-Chr6:718100 Lac9g2570 Lac-Chr9:44311303 9.00E-133 dispersed
Lac7g2556 Lac-Chr7:43781979 Lac9g2570 Lac-Chr9:44311303 3.40E-250 dispersed
Lac9g2008 Lac-Chr9:39705647 Lac9g2570 Lac-Chr9:44311303 1.10E-119 dispersed
Lac12g1923 Lac-Chr12:35968021 Lac9g2570 Lac-Chr9:44311303 1.30E-85 transposed
Lac13g0722 Lac-Chr13:5563906 Lac9g2570 Lac-Chr9:44311303 5.00E-190 transposed
Lac2g1279 Lac-Chr2:10556534 Lac9g2570 Lac-Chr9:44311303 2.40E-96 transposed
Lac5g0104 Lac-Chr5:849407 Lac9g2570 Lac-Chr9:44311303 9.70E-84 transposed
Lac5g2487 Lac-Chr5:43410405 Lac9g2570 Lac-Chr9:44311303 7.10E-88 transposed
Lac8g2615 Lac-Chr8:43734253 Lac9g2570 Lac-Chr9:44311303 2.60E-87 transposed
Lac9g0132 Lac-Chr9:2057943 Lac9g2570 Lac-Chr9:44311303 3.20E-29 transposed
Lac7g2551 Lac-Chr7:43702577 Lac9g2570 Lac-Chr9:44311303 7.30E-136 wgd
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Lac2g1279 . 3 554 MLO family AT5G53760 68.6 8.8e-211 730.7
Lac8g2615 . 9 551 MLO family AT5G53760 68.0 6.5e-206 714.5
Lac7g2551 . 10 473 MLO family AT3G45290 55.4 1.2e-139 494.2
Lac2g1279 . 3 554 MLO family AT1G26700 67.9 4.1e-213 738.4
Lac8g2615 . 9 551 MLO family AT1G26700 66.9 4.4e-199 691.8
Lac7g2556 . 8 536 MLO family AT2G39200 63.3 4.1e-192 668.7
Lac9g2570 . 8 504 MLO family AT2G39200 67.6 1.7e-190 663.3
Lac13g0722 . 4 497 MLO family AT2G39200 67.1 1.7e-190 663.3
Lac9g2570 . 8 415 MLO family AT1G61560 67.6 3.9e-160 562.0
Lac7g2556 . 8 416 MLO family AT1G61560 67.7 5.7e-159 558.1
Lac13g0722 . 4 406 MLO family AT1G61560 66.7 6.5e-155 544.7
Lac1g3099 . 28 424 MLO family AT1G61560 52.2 1.3e-115 414.1
Lac6g0081 . 10 413 MLO family AT1G61560 50.2 4.9e-110 395.6
Lac1g3099 . 10 498 MLO family AT2G17430 61.3 1.2e-169 594.0
Lac5g0037 . 32 492 MLO family AT2G17430 62.8 1.8e-157 553.5
Lac6g0081 . 2 477 MLO family AT2G17430 59.3 4.2e-154 542.3
Lac1g3099 . 28 586 MLO family AT2G17480 62.4 8.6e-193 671.0
Lac5g0037 . 7 579 MLO family AT2G17480 60.3 6.8e-182 634.8
Lac6g0081 . 12 462 MLO family AT2G17480 61.2 1.3e-156 550.8
Lac7g2556 . 8 463 MLO family AT2G17480 52.2 4.5e-125 446.0
Lac9g2570 . 8 462 MLO family AT2G17480 51.0 1.3e-124 444.5
Lac13g0722 . 4 453 MLO family AT2G17480 50.3 1.8e-118 424.1
Lac6g0081 . 12 378 MLO family AT1G42560 61.7 1.6e-128 456.8
Lac1g3099 . 28 388 MLO family AT1G42560 59.3 9.6e-121 431.0
Lac5g0037 . 32 391 MLO family AT1G42560 55.0 9.0e-111 397.9
Lac7g2556 . 8 381 MLO family AT1G42560 50.4 8.2e-96 348.2
Lac9g0132 . 9 178 MLO family AT4G24250 55.3 5.9e-44 176.0
Lac1g3099 . 8 389 MLO family AT5G65970 65.2 1.9e-142 503.4
Lac5g0037 . 30 391 MLO family AT5G65970 65.7 4.1e-137 485.7
Lac6g0081 . 9 378 MLO family AT5G65970 60.4 3.8e-122 436.0
Lac9g2570 . 2 380 MLO family AT5G65970 51.8 6.4e-106 382.1
Lac6g0081 . 2 535 MLO family AT2G33670 61.7 3.3e-177 619.0
Lac1g3099 . 28 510 MLO family AT2G33670 58.2 7.3e-153 538.1
Lac5g0037 . 32 474 MLO family AT2G33670 57.8 6.0e-139 491.9
Lac7g2556 . 8 482 MLO family AT2G33670 50.7 1.4e-127 454.1
Lac13g0722 . 62 520 MLO family AT1G11310 64.7 9.7e-169 590.9
Lac7g2556 . 63 506 MLO family AT1G11310 65.1 1.0e-165 580.9
Lac9g2570 . 63 519 MLO family AT1G11310 63.8 5.0e-165 578.6
Lac12g1923 . 1 488 MLO family AT2G44110 53.1 1.2e-139 494.2
Lac12g1923 . 1 495 MLO family AT4G02600 64.6 1.9e-183 639.8
Lac9g0132 . 8 178 MLO family AT4G02600 50.3 1.8e-37 154.8
Lac5g2487 . 3 561 MLO family AT1G11000 67.8 1.8e-216 749.6
Lac5g0104 . 4 459 MLO family AT1G11000 52.9 1.2e-130 464.5
Lac12g1923 . 1 495 MLO family AT4G02600 64.6 1.9e-183 639.8
Lac9g0132 . 8 178 MLO family AT4G02600 50.3 1.8e-37 154.8
Lac13g0722 . 62 520 MLO family AT1G11310 64.7 9.7e-169 590.9
Lac7g2556 . 63 506 MLO family AT1G11310 65.1 1.0e-165 580.9
Lac9g2570 . 63 519 MLO family AT1G11310 63.8 5.0e-165 578.6
Lac7g2551 . 10 473 MLO family AT3G45290 55.4 1.2e-139 494.2
Lac5g2487 . 3 561 MLO family AT1G11000 67.8 1.8e-216 749.6
Lac5g0104 . 4 459 MLO family AT1G11000 52.9 1.2e-130 464.5
Lac6g0081 . 2 535 MLO family AT2G33670 61.7 3.3e-177 619.0
Lac1g3099 . 28 510 MLO family AT2G33670 58.2 7.3e-153 538.1
Lac5g0037 . 32 474 MLO family AT2G33670 57.8 6.0e-139 491.9
Lac7g2556 . 8 482 MLO family AT2G33670 50.7 1.4e-127 454.1
Lac9g2570 . 8 415 MLO family AT1G61560 67.6 3.9e-160 562.0
Lac7g2556 . 8 416 MLO family AT1G61560 67.7 5.7e-159 558.1
Lac13g0722 . 4 406 MLO family AT1G61560 66.7 6.5e-155 544.7
Lac1g3099 . 28 424 MLO family AT1G61560 52.2 1.3e-115 414.1
Lac6g0081 . 10 413 MLO family AT1G61560 50.2 4.9e-110 395.6
Lac1g3099 . 10 498 MLO family AT2G17430 61.3 1.2e-169 594.0
Lac5g0037 . 32 492 MLO family AT2G17430 62.8 1.8e-157 553.5
Lac6g0081 . 2 477 MLO family AT2G17430 59.3 4.2e-154 542.3
Lac1g3099 . 28 586 MLO family AT2G17480 62.4 8.6e-193 671.0
Lac5g0037 . 7 579 MLO family AT2G17480 60.3 6.8e-182 634.8
Lac6g0081 . 12 462 MLO family AT2G17480 61.2 1.3e-156 550.8
Lac7g2556 . 8 463 MLO family AT2G17480 52.2 4.5e-125 446.0
Lac9g2570 . 8 462 MLO family AT2G17480 51.0 1.3e-124 444.5
Lac13g0722 . 4 453 MLO family AT2G17480 50.3 1.8e-118 424.1
Lac6g0081 . 12 378 MLO family AT1G42560 61.7 1.6e-128 456.8
Lac1g3099 . 28 388 MLO family AT1G42560 59.3 9.6e-121 431.0
Lac5g0037 . 32 391 MLO family AT1G42560 55.0 9.0e-111 397.9
Lac7g2556 . 8 381 MLO family AT1G42560 50.4 8.2e-96 348.2
Lac1g3099 . 8 389 MLO family AT5G65970 65.2 1.9e-142 503.4
Lac5g0037 . 30 391 MLO family AT5G65970 65.7 4.1e-137 485.7
Lac6g0081 . 9 378 MLO family AT5G65970 60.4 3.8e-122 436.0
Lac9g2570 . 2 380 MLO family AT5G65970 51.8 6.4e-106 382.1
Lac2g1279 . 3 554 MLO family AT5G53760 68.6 8.8e-211 730.7
Lac8g2615 . 9 551 MLO family AT5G53760 68.0 6.5e-206 714.5
Lac7g2556 . 8 536 MLO family AT2G39200 63.3 4.1e-192 668.7
Lac9g2570 . 8 504 MLO family AT2G39200 67.6 1.7e-190 663.3
Lac13g0722 . 4 497 MLO family AT2G39200 67.1 1.7e-190 663.3
Lac9g0132 . 9 178 MLO family AT4G24250 55.3 5.9e-44 176.0
Lac2g1279 . 3 554 MLO family AT1G26700 67.9 4.1e-213 738.4
Lac8g2615 . 9 551 MLO family AT1G26700 66.9 4.4e-199 691.8
Lac12g1923 . 1 488 MLO family AT2G44110 53.1 1.2e-139 494.2
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0001805 3 2 2 3 3 2 3 2 2 2 2 2 3 2 2 3 2 2 3 2 2 2 1 2 2 2 2 2 2 4 68