Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lac9g2686 ATGAGGGCGTTGCAATTGCAGCTTAGAGTTGACGCCAATCTTCTAAATCCATATTGTCATTTCTGCCCTGCTTCATCTCTAAATCCATCGCTATTGCTTGTTTTTCAACCAATAAAATTCCCCCATCTCCAGAAGTTCAAGCCTTCTCGAAGTTCCCGTCGAACCCATTTTTGTACTCCAACATCTTTCATCGTAGCTTCCATGGCCGATTCCTCTCTTTCCACAAGCTCAGAGACGGAGACGAAACCTTTCTCTGTGCTCTTTGTGTGCTTGGGCAACATTTGCAGAAGCCCAGCTGCTGAAGGAGTATTCAGGGACCTTGTGAGGAAGAAGGGTCTCGATTCCAAATTCATGATCGATTCTGCTGGCACCATTGGTTACCATGAGGGTAATGAGGCCGACCCAAGAATGAGAGCAGCCTCTAAACGACGCGGGATAGCGATTACATCCTTATCGAGGCCAATCCAGCCATCTGATTTTGTAAATTTTGATCTTATTCTTGCCATGGACAAGCAAAACAGAGAGGATATTTTAAGGGCTTTTGAACGGTGGAGAATCAGGGATACCCTTCCTCCTGATTCACATAAGAAGGTCAAATTAATGTGCTCGTATTGTAGAAAGCATGACGAAACAGAAGTACCGGATCCTTATTACGGTGGGCAACAAGGTTTTGAGAAGGTTCTGGACTTGCTTGAAGATGCCTGTGAATCACTGTTGGAAAGCATCTTAGCAGAGAACAAACACATTTCAGATTAA 756 44.44 MRALQLQLRVDANLLNPYCHFCPASSLNPSLLLVFQPIKFPHLQKFKPSRSSRRTHFCTPTSFIVASMADSSLSTSSETETKPFSVLFVCLGNICRSPAAEGVFRDLVRKKGLDSKFMIDSAGTIGYHEGNEADPRMRAASKRRGIAITSLSRPIQPSDFVNFDLILAMDKQNREDILRAFERWRIRDTLPPDSHKKVKLMCSYCRKHDETEVPDPYYGGQQGFEKVLDLLEDACESLLESILAENKHISD 251
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
9 45163915 45165721 - Lag0010173.1 Lac9g2686 621612
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lac9g2686 251 SMART LMWPc_2 84 241 IPR023485 -
Lac9g2686 251 Pfam Low molecular weight phosphotyrosine protein phosphatase 86 239 IPR023485 -
Lac9g2686 251 FunFam Low molecular weight protein-tyrosine-phosphatase 83 247 - -
Lac9g2686 251 CDD LMWPTP 85 240 - -
Lac9g2686 251 PRINTS LMW phosphotyrosine protein phosphatase signature 86 103 IPR017867 GO:0004725(InterPro)|GO:0006470(InterPro)
Lac9g2686 251 PRINTS LMW phosphotyrosine protein phosphatase signature 129 145 IPR017867 GO:0004725(InterPro)|GO:0006470(InterPro)
Lac9g2686 251 PRINTS LMW phosphotyrosine protein phosphatase signature 213 228 IPR017867 GO:0004725(InterPro)|GO:0006470(InterPro)
Lac9g2686 251 SUPERFAMILY Phosphotyrosine protein phosphatases I 82 242 IPR036196 -
Lac9g2686 251 Gene3D - 67 247 - -
Lac9g2686 251 PANTHER LOW MOLECULAR WEIGHT PHOSPHOTYROSINE PROTEIN PHOSPHATASE-RELATED 66 248 IPR052995 -
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac9g2686 K25307 - csv:101207515 428.328