Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lac9g2689 | ATGGAGTCCTCTACCGACGACATCGCCGACGACCTCCAGAGCCTCAGCTTCAACTCCACCAACACCAACCGCAGCAACAGCTCCGGCTCCGAGACCACTCTCACCGCCTCCTCCTCCTCCTTTGTTCACATCCCTTCCATTCTCAACAAGCCTCACGCGCCTTCCTCCGACCCTTGCTGGTCTGCCGTTAACCGGATCCGATCCGACTCGTCCACTCGCCAACTCGCCTTCTCCGACCTCAAGTTCTCGCACCGTCTCGGCTCTGGCGACATTGGCTCCGTCTACCTCGCCGGCCTCAAGTCCGCCGGAGCCGACGGATGCCTGTTCGCGGCGAAGGTAATGGATAAGAAGGAACTGGCGAGTCGGAGTAAAGAAGGCAGAGCGAAGACCGAGAGGGAGATTTTGGAGTCTTTGGACCATCCGTTTCTTCCGACGCTCTACGCTAGTATCGACTCGCCGAAGTGGCTCTGTCTCTTGACTGAGTTCTGTCCCGGCGGCGACCTCCATGTTCTCCGGCAACGGCAGCAGAACAAACGCTTCGATGAACTCGCCGTGAGGTGCGCACAATAG | 570 | 59.12 | MESSTDDIADDLQSLSFNSTNTNRSNSSGSETTLTASSSSFVHIPSILNKPHAPSSDPCWSAVNRIRSDSSTRQLAFSDLKFSHRLGSGDIGSVYLAGLKSAGADGCLFAAKVMDKKELASRSKEGRAKTEREILESLDHPFLPTLYASIDSPKWLCLLTEFCPGGDLHVLRQRQQNKRFDELAVRCAQ | 189 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 45179762 | 45180331 | + | Lag0010176.1 | Lac9g2689 | 621615 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lac9g2689 | 189 | SUPERFAMILY | Protein kinase-like (PK-like) | 57 | 186 | IPR011009 | - | |
Lac9g2689 | 189 | Pfam | Protein kinase domain | 82 | 182 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Lac9g2689 | 189 | MobiDBLite | consensus disorder prediction | 1 | 34 | - | - | |
Lac9g2689 | 189 | PANTHER | FLIPPASE KINASE 1-RELATED | 24 | 186 | - | GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER) | |
Lac9g2689 | 189 | FunFam | serine/threonine-protein kinase D6PKL2 | 79 | 166 | - | - | |
Lac9g2689 | 189 | Gene3D | Phosphorylase Kinase; domain 1 | 72 | 189 | - | - | |
Lac9g2689 | 189 | ProSiteProfiles | Protein kinase domain profile. | 80 | 189 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Lac9g2689 | 189 | MobiDBLite | consensus disorder prediction | 8 | 34 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lac9g2689 | Lac-Chr9:45179762 | Lac12g0426 | Lac-Chr12:4741509 | 1.10E-19 | dispersed | |
Lac9g2687 | Lac-Chr9:45166135 | Lac9g2689 | Lac-Chr9:45179762 | 3.20E-31 | proximal |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
86472 | PF00069 | Pkinase | 9.20E-13 | CL0016 | Lac | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lac9g2689 | K08286 | - | csv:101207262 | 324.324 |