Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac9g2689 ATGGAGTCCTCTACCGACGACATCGCCGACGACCTCCAGAGCCTCAGCTTCAACTCCACCAACACCAACCGCAGCAACAGCTCCGGCTCCGAGACCACTCTCACCGCCTCCTCCTCCTCCTTTGTTCACATCCCTTCCATTCTCAACAAGCCTCACGCGCCTTCCTCCGACCCTTGCTGGTCTGCCGTTAACCGGATCCGATCCGACTCGTCCACTCGCCAACTCGCCTTCTCCGACCTCAAGTTCTCGCACCGTCTCGGCTCTGGCGACATTGGCTCCGTCTACCTCGCCGGCCTCAAGTCCGCCGGAGCCGACGGATGCCTGTTCGCGGCGAAGGTAATGGATAAGAAGGAACTGGCGAGTCGGAGTAAAGAAGGCAGAGCGAAGACCGAGAGGGAGATTTTGGAGTCTTTGGACCATCCGTTTCTTCCGACGCTCTACGCTAGTATCGACTCGCCGAAGTGGCTCTGTCTCTTGACTGAGTTCTGTCCCGGCGGCGACCTCCATGTTCTCCGGCAACGGCAGCAGAACAAACGCTTCGATGAACTCGCCGTGAGGTGCGCACAATAG 570 59.12 MESSTDDIADDLQSLSFNSTNTNRSNSSGSETTLTASSSSFVHIPSILNKPHAPSSDPCWSAVNRIRSDSSTRQLAFSDLKFSHRLGSGDIGSVYLAGLKSAGADGCLFAAKVMDKKELASRSKEGRAKTEREILESLDHPFLPTLYASIDSPKWLCLLTEFCPGGDLHVLRQRQQNKRFDELAVRCAQ 189
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 45179762 45180331 + Lag0010176.1 Lac9g2689 621615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac9g2689 189 SUPERFAMILY Protein kinase-like (PK-like) 57 186 IPR011009 -
Lac9g2689 189 Pfam Protein kinase domain 82 182 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac9g2689 189 MobiDBLite consensus disorder prediction 1 34 - -
Lac9g2689 189 PANTHER FLIPPASE KINASE 1-RELATED 24 186 - GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER)
Lac9g2689 189 FunFam serine/threonine-protein kinase D6PKL2 79 166 - -
Lac9g2689 189 Gene3D Phosphorylase Kinase; domain 1 72 189 - -
Lac9g2689 189 ProSiteProfiles Protein kinase domain profile. 80 189 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lac9g2689 189 MobiDBLite consensus disorder prediction 8 34 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac9g2689 Lac-Chr9:45179762 Lac12g0426 Lac-Chr12:4741509 1.10E-19 dispersed
Lac9g2687 Lac-Chr9:45166135 Lac9g2689 Lac-Chr9:45179762 3.20E-31 proximal
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
86472 PF00069 Pkinase 9.20E-13 CL0016 Lac PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac9g2689 K08286 - csv:101207262 324.324