Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lac9g2690 | ATGGCGAGAGGCGAGGCGACCTGGGGTCATTGCGCCCTAAAGGCAACCAAGGCGAACTCCTTCAACCAGGCGTTCGCCCGGCAGCGCCTTTGGTCGCATTTCTACGCCTTTTCCATTTGTGGAGGCGACGCCTGGTTGCGCCTGGCTTCACTCGGGCGACGTCTTTTTGTCGCCTCTCGCCTTGAGGCAATCATGAAACTTATCGCCTCAAGATTCTATGCATCGGAGATAGTGGTTGCTATCGAGTATCTTCACATGATGGGGATCGTTTACCGTGATCTGAAGCCGGAAAATGTGCTGGTACGATCGGACGGCCATATCATGCTCACTGATTTCGATCTCTCCTTGAAGTGTGAAGATTCAACGTCGACCCCACAGGTTATCACTACTAAAAATCCGACAAATGGCACCGCCCCGCCAAAGGACTATCAAATTGATGTCCCTCCTTTCACATCATCCTCTTGCATACTTCCAAACTGCATAGTCCCAGCCGTGTCATGTTTCAACCCGAAACGCAAGCGCAAGAAGAAGTCTGGCCACCGGAATGGACCCGAGTTTGTCGCTGAACCGGTCGACGTTCGGTCAATGTCGTTTGTAGGCACTCACGAATACTTGGCGCCGGAGATTGTCTCCGGTGAGGGCCATGGAAGTGCAGTGGACTGGTGGACACTCGGGGTGTTTGTGTTTGAGTTGTTTTATGGAGTGACACCCTTTAGAGGCATGGACAATGAGCTCACCTTGGCCAACATAGTGGCCAGAGCTCTTGAGTTCCCTAAAGAACCGGCGGTCCCAGCAGCGGCGAAAGACCTTATCTCACAGTTACTGGTCAAAGATCCTGCCAGGCGGTTGGGGTCAACGACAGGGTCGTCTGCGATCAAGCACCATTCATTTTTCCAAGGGGTAAATTGGGCATTATTGAGATGTACGTCGCCACCATTTATTCCTCCACCTTTTAGTAAAGAAGTTGCATCAGAAAGCTGCCCAGAGGCCCCAGTGGATTATTATTAG | 1008 | 51.88 | MARGEATWGHCALKATKANSFNQAFARQRLWSHFYAFSICGGDAWLRLASLGRRLFVASRLEAIMKLIASRFYASEIVVAIEYLHMMGIVYRDLKPENVLVRSDGHIMLTDFDLSLKCEDSTSTPQVITTKNPTNGTAPPKDYQIDVPPFTSSSCILPNCIVPAVSCFNPKRKRKKKSGHRNGPEFVAEPVDVRSMSFVGTHEYLAPEIVSGEGHGSAVDWWTLGVFVFELFYGVTPFRGMDNELTLANIVARALEFPKEPAVPAAAKDLISQLLVKDPARRLGSTTGSSAIKHHSFFQGVNWALLRCTSPPFIPPPFSKEVASESCPEAPVDYY | 335 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 45182631 | 45184281 | + | Lag0010177.1 | Lac9g2690 | 621616 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lac9g2690 | 335 | Gene3D | Transferase(Phosphotransferase) domain 1 | 194 | 316 | - | - | |
Lac9g2690 | 335 | PANTHER | FLIPPASE KINASE 1-RELATED | 64 | 317 | - | GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER) | |
Lac9g2690 | 335 | ProSiteProfiles | Protein kinase domain profile. | 1 | 298 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Lac9g2690 | 335 | SMART | serkin_6 | 1 | 298 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Lac9g2690 | 335 | Pfam | Protein kinase domain | 64 | 131 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Lac9g2690 | 335 | Pfam | Protein kinase domain | 195 | 298 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Lac9g2690 | 335 | FunFam | Serine/threonine-protein kinase OXI1 | 56 | 120 | - | - | |
Lac9g2690 | 335 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 89 | 101 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Lac9g2690 | 335 | Gene3D | Transferase(Phosphotransferase) domain 1 | 63 | 130 | - | - | |
Lac9g2690 | 335 | FunFam | serine/threonine-protein kinase D6PK-like | 193 | 316 | - | - | |
Lac9g2690 | 335 | SUPERFAMILY | Protein kinase-like (PK-like) | 64 | 327 | IPR011009 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lac9g2690 | Lac-Chr9:45182631 | Lac9g2843 | Lac-Chr9:46427422 | 1.80E-46 | dispersed | |
Lac9g2687 | Lac-Chr9:45166135 | Lac9g2690 | Lac-Chr9:45182631 | 2.80E-75 | proximal |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
86473 | PF00069 | Pkinase | 3.30E-19 | CL0016 | Lac | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lac9g2690 | K08286 | - | csv:101207262 | 518.85 |