Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac9g2692 ATGAGCGGCGAAAGCCGAAGGCGAGGCCGCGCAGACAAGAGTAGGTCGAAGAAGCAGAGGATAATCCGGTCCGCCGAGGAGGAGATCGAATCAAAACTTGGATTTGATCTCTTCTCTGAAGGCGATAAGAGGCTTGGATGGTTGCTCACTTTCGCTCCTTCATCTTTGGAAGATCAGGATACTGGAAAGGTCTTTAGCTGTATTGACCTTTATTTTGTGGCACAGGATGGCAGCAGTTTCAAGTCAAAATATAAGTTCCGCCCTTATTTCTATGCAGCCACAAAGGATAAAATGGAAACTGACGTAGAGGCTTATTTGAGACGACGTTATGAAGGTCAAATAGCTGATATTGAGATTTTAGAAAAAGAAGACCTTGATCTTAAGAATCACCTGTCAGGCTTGCGCAAGGCATATTTAAAGCTATCATTTGACACTGTTCAAGAATTGATGAATGTGAAGAGTGAGCTATTGCATGTTGTTGAAAGCAATTGGGCAAAGTCTGATGCTGCAGAAGCATATGATTCTATCTTATTTGGGAAAAGGGAACAAAAGCCCCAAGATTTTCTAGAATGCATTGTTGATCTCCGAGAGTATGATGTTCCTTACCATGTTCGCTTCGCTATTGATCATGATTTGCGCTGTGGACAATGGTACGATGTTAGCGTATCAAGCACTGGTGTTACACTTGAGAAGAGAAAAGATCTTCTGCAACGTGCTGAAGTTCACATATGTGCATTTGATATTGAGACAACAAAGCTACCATTGAAATTTCCAGATGCTGAATATGACATGATAATGATGATTTCCTATATGGTTGATGGACAAGGGTACTTGATTATCAACAGAGAGTGTGTTGGGGAAGATATTGAGAATTTGGAGTACACCCCAAAACCAGAATATGAAGGGTTCTTTAAAGTGACCAATGTGAAAAATGAGTTAGAGCTTCTCAAACAGTGGTTTGCCCATATGCGAGAGGTGAAACCTGGTATCTATGTCACCTACAATGGTGATTATTTTGACTGGCCATTCATTGAAAGCAGAGCAGCCTATCATGGATTTAAAATGAGTGATGAAGTAGGATTTCAATGCGACAAGAATCAGGGAGAATGCCGTTCAAAATTTGCTTGTCATTTGGATTGCTTTGCCTGGGTAAAACGTGATAGTTATCTTCCTCAGGGTAGCCATGGTTTGAAGGCTGTCACAAAAGCTAAATTGGGTTATGATCCTCTTGAAGTGAATCCCGAGGATATGGTGCGGTTTGCAAAGGAAAAGCCTCAGATGATGGCTTCCTATTCTGTTTCAGATGCTGTTGCTACGTACTACTTGTACATGACCTATGTTCATCCTTTTATTTTTTCTCTAGCAACTATTATTCCAATGTCACCAGATGAGGTGTTGCGCAAGGGAAGTGGGACACTTTGTGAAATGCTTCTAATGGTTCAGGCTTACAAGGCCAATGTTGTGTGTCCTAACAAACATCAATCAGATCCAGAGAAGTTCTATAACAACCGGCTTCTCGAAAGTGAGACATACATAGGTGGTCATGTAGAATGCCTAGAGAGTGGTGTATTTAGATCGGACCTTCCTACCAGTTTTAGGCTCGATCCATCTGCTTATGATCAATTGATATACAATCTGGATCGAGATCTGCAATATGCCATTCAAGTAGAAGGAAAGATGGACTTGGAGTTGGTGTCAAATTATAGCGATGTGAAGAATGCTATCATGGAAAAGCTTATTAGATTGCGGGATGAACCAGTACGTGAAGAGGGCCCTCTGATATATCACCTTGATGTCGCTGCAATGTATCCTAACATTATTTTAACCAATAGACTTCAGCCGCCATCAATAGTAACAGATGAGATTTGTACTGCTTGTGATTTCAATCGTCCTGGGAAAACTTGTCTACGAAAACTTGAATGGGTTTGGCGTGGAGAGGTATTCATGGCTAAAAAAAGTGACTATTATCATTTGAAGAAGCAAATTGAGTCTGAGTTTGTCGATAGCGGCAGTGTTCGGTTATCAAAATCATTTCTTGAACTTCCAAAGTTGGAGCAACAAGCAAAACTCAAAGAACGTTTAAAGAAATACTGTCAGAAGGCTTATAAACGAGTACTTGATAAGCCAGTCACCGAAGTTCGAGAAGCAGGAATTTGCATGAGAGAGAACTCTTTCTATATTGACACTGTTCGTAGTTTCCGAGATAGAAGGTACGAATACAAAGGGCTCAATAAAGTATGGAAGGGGAAGTTATCAGAAGCTAAAGCAAGTGGAAATTCAATCAAGATCCAGGAAGCCCAAGACATGGTAGTTCTTTATGATTCTCTACAACTCGCTCATAAATGTATCCTTAACTCTTTTTATGGATATGTGATGCGAAAGGGTGCTCGATGGTATTCAATGGAAATGGCTGGGGTAGTTACATATACTGGAGCAAAAATCATTCAGAATGCTCGTCTGTTAATTGAGAAAATTGGAAAACCACTGGAGTTAGACACCGATGGTATCTGGTGTGCACTACCTGGATCATTTCCAGAGAACTTTACCTTCAAAACAAAAGATTTGAAGAAGTTGACAATTTCATATCCATGTGTTATGCTTAATGTTGATGTGGCAAGAAACAACACAAATGATCAATACCAGACGCTTATAGATCCTGTGAAGAAAATATATAAAACACATAGTGAATGCTCAATTGAATTTGAAGTAGATGGACCGTACAAGGCAATGATCCTTCCTGCTTCCAAGGAAGAAGGCATTTTGATCAAGAAGAGATATGCTGTCTTCAATGATGATGGAACACTTGCAGAGCTAAAAGGCTTTGAGATCAAGCGTAGGGGGGAGTTAAAACTCATCAAAGTTTTCCAGGCTGAACTTTTTGACAAGTTTCTTCATGGTTCCACCTTAGAAGAATGCTATTCAGTTGTTGCATCTGTTGCAAATCGCTGGCTAGATCTTCTGGATAATCAAGGAAAAGATATTGCAGATAGCGAGTTGCTTGATTACATATCTGAATCCAGTACCATGAGCAAATCTTTGGCAGATTATGGGGAACAAAAGTCTTGTGCTGTTACCACTGCAAGACGTCTTGCAGATTTTCTTGGTGATACAATGGTCAGGGATAAAGGCCTACGTTGTCAATATATAGTTGCATGTGAACCTAAGGGAACACCTGTAAGTGAGCGTGCTGTTCCAGTTGCAATATTTGAGACTGATGCAGAGATTATGAAATTTTATGTACGTAAGTGGTGCAAGATTTCATCTGAAGTCGGAATCCGATCCATCATTGACTGGTCCTACTACAAGCAACGCCTAAGCTCAGCCATTCAAAAAATTATAACAATTCCAGCGGCCATGCAAAAGGTTGCAAATCCTGTTCCTAGGGTGGTCCATCCTGATTGGTTACATAAGAAAGTTCGTGAGAAGGATGATAAATTTCGCCAACAGAAAGTAGCCGATATGTTTGCATCCTCAAACAGAGGTAAATATTCAAAGAAAAATAGTGATGTTAGCTGCAGCAAACATGTGATGAATGAAGATTATTCTGAAGATTTAGAAGATTTTCAAAAGAAAACAAGTTCTACAAATGGCCCCAAACCAGTTGTCCGATGTCATGATGTCAGAGGCATGAAACATTCAGTTACAAGCAATAGCGAAATAAACTCCATGATGCAGGAGAATCTTAATGATGGAGGATGTGGGTCTTCTTCACCCATGCATGTTGAAAACATCGACAAAAATGTAGATTACAATGGATGGCTTGAAATGAAGAAACGAAAGTGGAAGGATACTTTGGACAAGAGGAAGAAGCAAAGGTTGGTAAGTTCAAGGACTCCGCTTGCTGCTAATGGTGTTGCAAGGGAGTTAATTGGTGCTATGAATAATAAAGAGGATCCTAGAACAGGTGTTGGTTCATATTTTAAGAGGCATGAAGGATCTCTAACACGCTGCCATTGGCAGATTTTACAGCTTGTTCGTGGTTCACAGAGTGGCCAATATTTTGCTTGGGCTGTTGTTGGAGGAGTTATGCTAAAGATTCCCATTACTATTCCTAGAGTTTTTTACCTTAATTCTAAAGTACCTATTACAGATGAATTTGTGGGTAGGCGTGTTAACAAAACTCTTCCCCATGGAAGACACAGCTATAACCTGTATGAGGTTGTGACTGATGAAGGTCAATTTAGGACGCAGAGGAATAAACTTGCAGCCCTCCTTGCAGATCCAGAAGTAGAGGGAATCTATGAAAGCAAGCTACCACCGGAATTCAGGTCCATCTTTCAGATTGGTTGTGTCTGTAAAGTTGATAAAACTGCTAAAAAACGAAACATTCAAGATGGATGGAGTTTGGATGAACTGCAAATGAAGACTACAACAGAATGCAGTTATCTGGAAAAGCCAATCTCTTTCTTCTATGTGTATCATAGCATTTCTGAAGGAAGAGCTATGTACATTACCTTTTTTCCCTCTACAAGATCAATACTTGTGGTGGTGGTTAGTCCTTACCAAAACAAGGACTTGTCGACAACTTTTCTTGAAAGGCAATTTCGTGAAGCTTGTCAAATGTTGTCTGGTGAATCACAACCTCCTAAGAGTGGTATAACTTACAAGGTTGACTATGTTGTTAACATCAAAGAAGCTGAAGTGATTTTGCAAAGATCGGTAGCAGAACACAGGAGCATAAACCATGGACCTATTGTAGCTGTAATTCAATGCCCAAATGTGCAACTGCTGAAGTCAGGTGTGAGAGCATTATATGATTTTCCATGCGTGAGCATTCCTTCTAATGCTCGTGATAGTCAATATCAGGTTCTTGGTTGGCAACAAACAGCTGCAAAGACTGGTATGCAACGCTGTGCTGCATCATCCCAATGGTTGAATGAGAGAATCTCTCTTTCAAGATATGCCCATGTACCATTAGGAAATTTTGAACTTGATTGGCTAATTTTTACAGCAGATATATTTTTTTCAAGAGCATTACATGATCAACAGCAGGTACTTTGGATATCGGATGATGGTGTTCCCGATATAGGAGGCACTAACATAGAAGATGTGTGTTTCGCGGATGAGGTCCAACAACCTTTTCTGACGTACCCTGGAGCATATAGAAAAGTTTCCGTTGAGCTGAAGATCCATCATTTGGCTGTCAATGCTCTGCTGAAGAGCAACCAAGTGAATGAAATGGAAGGAGGTAGTTTGTTTGGCTTTGAACATGATATGCATTGTGGGGTCCAACTTTCTAATGAAGAAGGTGGCTTCGATGAGGCTGCATCATCTGCGCCGGCATTTCGTGTCCTGAAACAATTGATACAAAGGTGTCTTGCAGATGCAGTAACATCTGGAAATGTATATGCTGATGCAATTTTGCAGCATCTGTACCGATGGATTTGCAGCCCCCAATCAAGACTTCATGACCCAGCTCTTCATCGCTTGCTCCACAAGGTTATGCAAAAGGTGTTTGCTCTTTTGTTGGCTGAACTACGCAAATTAGGTGCCAACATTATATTTGCAAACTTCTCAAGAATTATTATAGACACGGGAAGGTTTGATCTCTCTGCTGCTAAAGCATACTGTGATAGCTTGCTGAAAACAGTGCAAACAAGGGATCTGTTTGAGTGGATTGAGCTGGAACCATTACAGTTCTGGCACTCCCTGTTGTTTATGGATCAGTATAACTATGGCGGAATCCCAGCAAAAGATGATGAGAGCGCAGATATTGAATCTCAAGTTGATATAGTGGCCAACTGGAACATTGCCGAATATCTACCCAAGAAGATTCAGGATCACTTTGTTTTTATCATCTCTCAATTTTTGTATATTCCATGGAATTATGCGACCAAGCAAGCTGCAGCAAGAGCATCATTGCAGCATGGTGACACATGTACCCCTTCCATTACTGTTTTAGCTGCTGAATCATTTGAATCACGAGTGACAGAACATCTCAAAGAGCAGCTAAGCTCTTACTTCAGCGACAAACTGTTGGGAATTGTTCGTGATATTATTCTTCATATGAAAGGGATGGGCAAGAACACCCAGGATATGTTACCAGAACAGCCTTCTGGTAATATCCACAAAGGAGATGCTGCATTGGAATTCATTAAGCTCGTTTGCGCTGTTTTGGCTCTTGATCAAAATGTCCAGCATGATGTTCTGGTAATGAGGAAAAATTTACTGAAGTATGTGCGTGTAAGAGAGTTTGCACCAGAAGCTGAGTTTTCTGATTCGTGCCTGTCCATTATCTTACCCAACGTTATTTGCAGCTATTGTGACGATTGTCGAGATTTGGACTTGTGCCGTGACTCGGCTTTACTAGCGCCGGAATGGTGCTGTCCCGTGCCTCAATGTGGACAACCATACAACCGAGAAGTGATGGAGAATGCTCTGCTTCAAATCGTGCGGCAGAGGGAGCGCCTCTATCACGTACAGGATCTGGTATGTGTTCGTTGCAAGCAAGTCAAAGCAGCTCATTTGTCAGAACAATGTGCTTGTGCTGGCACATTTAAATGCAAAGATGTGAAAGAATTTTTCAGTAAGATGCAGATTTTCCTCAACGTAGCCACTCGTCAGAAGTTTCCACTGCTGCAAGAGTTCACCTCGTGGATCTTAGAATTCTCATAA 6615 40.91 MSGESRRRGRADKSRSKKQRIIRSAEEEIESKLGFDLFSEGDKRLGWLLTFAPSSLEDQDTGKVFSCIDLYFVAQDGSSFKSKYKFRPYFYAATKDKMETDVEAYLRRRYEGQIADIEILEKEDLDLKNHLSGLRKAYLKLSFDTVQELMNVKSELLHVVESNWAKSDAAEAYDSILFGKREQKPQDFLECIVDLREYDVPYHVRFAIDHDLRCGQWYDVSVSSTGVTLEKRKDLLQRAEVHICAFDIETTKLPLKFPDAEYDMIMMISYMVDGQGYLIINRECVGEDIENLEYTPKPEYEGFFKVTNVKNELELLKQWFAHMREVKPGIYVTYNGDYFDWPFIESRAAYHGFKMSDEVGFQCDKNQGECRSKFACHLDCFAWVKRDSYLPQGSHGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAYKANVVCPNKHQSDPEKFYNNRLLESETYIGGHVECLESGVFRSDLPTSFRLDPSAYDQLIYNLDRDLQYAIQVEGKMDLELVSNYSDVKNAIMEKLIRLRDEPVREEGPLIYHLDVAAMYPNIILTNRLQPPSIVTDEICTACDFNRPGKTCLRKLEWVWRGEVFMAKKSDYYHLKKQIESEFVDSGSVRLSKSFLELPKLEQQAKLKERLKKYCQKAYKRVLDKPVTEVREAGICMRENSFYIDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLIEKIGKPLELDTDGIWCALPGSFPENFTFKTKDLKKLTISYPCVMLNVDVARNNTNDQYQTLIDPVKKIYKTHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTLEECYSVVASVANRWLDLLDNQGKDIADSELLDYISESSTMSKSLADYGEQKSCAVTTARRLADFLGDTMVRDKGLRCQYIVACEPKGTPVSERAVPVAIFETDAEIMKFYVRKWCKISSEVGIRSIIDWSYYKQRLSSAIQKIITIPAAMQKVANPVPRVVHPDWLHKKVREKDDKFRQQKVADMFASSNRGKYSKKNSDVSCSKHVMNEDYSEDLEDFQKKTSSTNGPKPVVRCHDVRGMKHSVTSNSEINSMMQENLNDGGCGSSSPMHVENIDKNVDYNGWLEMKKRKWKDTLDKRKKQRLVSSRTPLAANGVARELIGAMNNKEDPRTGVGSYFKRHEGSLTRCHWQILQLVRGSQSGQYFAWAVVGGVMLKIPITIPRVFYLNSKVPITDEFVGRRVNKTLPHGRHSYNLYEVVTDEGQFRTQRNKLAALLADPEVEGIYESKLPPEFRSIFQIGCVCKVDKTAKKRNIQDGWSLDELQMKTTTECSYLEKPISFFYVYHSISEGRAMYITFFPSTRSILVVVVSPYQNKDLSTTFLERQFREACQMLSGESQPPKSGITYKVDYVVNIKEAEVILQRSVAEHRSINHGPIVAVIQCPNVQLLKSGVRALYDFPCVSIPSNARDSQYQVLGWQQTAAKTGMQRCAASSQWLNERISLSRYAHVPLGNFELDWLIFTADIFFSRALHDQQQVLWISDDGVPDIGGTNIEDVCFADEVQQPFLTYPGAYRKVSVELKIHHLAVNALLKSNQVNEMEGGSLFGFEHDMHCGVQLSNEEGGFDEAASSAPAFRVLKQLIQRCLADAVTSGNVYADAILQHLYRWICSPQSRLHDPALHRLLHKVMQKVFALLLAELRKLGANIIFANFSRIIIDTGRFDLSAAKAYCDSLLKTVQTRDLFEWIELEPLQFWHSLLFMDQYNYGGIPAKDDESADIESQVDIVANWNIAEYLPKKIQDHFVFIISQFLYIPWNYATKQAAARASLQHGDTCTPSITVLAAESFESRVTEHLKEQLSSYFSDKLLGIVRDIILHMKGMGKNTQDMLPEQPSGNIHKGDAALEFIKLVCAVLALDQNVQHDVLVMRKNLLKYVRVREFAPEAEFSDSCLSIILPNVICSYCDDCRDLDLCRDSALLAPEWCCPVPQCGQPYNREVMENALLQIVRQRERLYHVQDLVCVRCKQVKAAHLSEQCACAGTFKCKDVKEFFSKMQIFLNVATRQKFPLLQEFTSWILEFS 2204
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 45189083 45228568 + Lag0010179.1 Lac9g2692 621618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac9g2692 2204 MobiDBLite consensus disorder prediction 1 21 - -
Lac9g2692 2204 FunFam DNA polymerase epsilon catalytic subunit 723 798 - -
Lac9g2692 2204 Pfam DNA polymerase epsilon catalytic subunit A, thumb domain 945 1120 - -
Lac9g2692 2204 CDD POLBc_epsilon 503 1121 - -
Lac9g2692 2204 SMART DUF1744_2 1510 1895 IPR013697 GO:0003887(InterPro)|GO:0005634(InterPro)|GO:0006260(InterPro)|GO:0008270(InterPro)
Lac9g2692 2204 SUPERFAMILY DNA/RNA polymerases 469 1137 IPR043502 -
Lac9g2692 2204 FunFam DNA polymerase epsilon catalytic subunit 56 227 - -
Lac9g2692 2204 Gene3D - 238 468 IPR036397 GO:0003676(InterPro)
Lac9g2692 2204 Gene3D - 940 1124 IPR042087 -
Lac9g2692 2204 CDD DNA_polB_epsilon_exo 240 444 - -
Lac9g2692 2204 Pfam Domain of unknown function (DUF1744) 1524 1895 IPR013697 GO:0003887(InterPro)|GO:0005634(InterPro)|GO:0006260(InterPro)|GO:0008270(InterPro)
Lac9g2692 2204 Gene3D Palm domain of DNA polymerase 752 936 IPR023211 -
Lac9g2692 2204 FunFam DNA polymerase epsilon catalytic subunit 756 936 - -
Lac9g2692 2204 FunFam DNA polymerase epsilon catalytic subunit 240 468 - -
Lac9g2692 2204 SMART polmehr3 239 842 IPR006172 GO:0000166(InterPro)|GO:0003676(InterPro)|GO:0003887(InterPro)
Lac9g2692 2204 FunFam DNA polymerase epsilon catalytic subunit 940 1124 - -
Lac9g2692 2204 SUPERFAMILY Ribonuclease H-like 62 490 IPR012337 -
Lac9g2692 2204 Gene3D DNA Polymerase, chain B, domain 1 57 233 - -
Lac9g2692 2204 PANTHER DNA POLYMERASE EPSILON CATALYTIC SUBUNIT A 3 2165 IPR029703 GO:0000278(PANTHER)|GO:0003677(InterPro)|GO:0003677(PANTHER)|GO:0003887(PANTHER)|GO:0003887(InterPro)|GO:0006260(InterPro)|GO:0006272(PANTHER)|GO:0006281(InterPro)|GO:0006287(PANTHER)|GO:0006297(PANTHER)|GO:0008310(PANTHER)|GO:0008622(PANTHER)|GO:0008622(InterPro)|GO:0045004(PANTHER)
Lac9g2692 2204 Pfam Zinc finger domain of DNA polymerase-epsilon 2140 2201 IPR054475 -
Lac9g2692 2204 Pfam DNA polymerase family B, exonuclease domain 194 400 IPR006133 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac10g0329 Lac-Chr10:2558628 Lac9g2692 Lac-Chr9:45189083 0.00E+00 dispersed
Lac8g1974 Lac-Chr8:38173204 Lac9g2692 Lac-Chr9:45189083 6.80E-20 dispersed
Lac9g2692 Lac-Chr9:45189083 Lac7g1484 Lac-Chr7:15705583 7.20E-19 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac9g2692 K02324 - csv:101208568 4125.47