Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac9g2737 ATGGCGACGTACTTTCACGGTGGTTCAGAAATCCAAGCGAATTCTGACGGAATTCACACTCTTTACCTTATGAACCCCAATTATGTACCTTACTCTGACACACACTCTCAAACGCCTCCCAATATGCTCTTTCTCAACCCTTCCGGCCACGCGCTTACTCCTTCCACTCTCCCCACGCGCCGCCTTCCAACAACCACTTCGTCGGAATTCCTCTCCCCACCACCGACGCTTCTCGTCCCTCCTACGCTTCTCAATCCCACCACGAGATCTCAGCCCTCCACTCCGTCCCAGCTCAGCGCCTCCACTACAATCTCTGGGCTCCTATGGACCAATCCCCCCACGGAATCTCCGCCGTGTCGGCCACCACCGACTCCGCCGATTTGGGCTTCCGCCGCCCGGCGACACAGCAGGGAGATTCAAGGCGGCGGCAGCGGCGGGGGAGGTGGAGGTGGCGCTCCGGCTATCTCGCCGACGAGTGGGGATGAGATAAGGGTGTCTGGAAATTCGCCGACGTCGGTGTCGGTGGTGTCGAGTGGAATAACGGGGGTTCAAAGTGTGATATTGGGGTCCAAGTACTTGAAAGCGGCACAAGAACTTTTGGATGAAGTCGTTAATGTTGGCAAAGGAAACAATAAAACCGACAAAGGGGATGGGACAAAGGACAAGATGAAGATGAAGAAAGAATCCACCGCTGCGGTTGCTGAGCCTTCCGCCGCCGGCGCTGAAAGTACTTCCAAGCCCGCCCCTGAGCTCAGCACTGCTCAAAGACAGGACCTTCAGATGAAGAAAGCTAAGCTTATTGGCATGCTTGATGAGGTGGAGCAAAAGTACAGACAGTACCACCAGCAAATGCAAGCAGTGGTTTGTTCGTTCGAGCAGGCGGCAGGGTTGGGGTCGGCCAAGTCCTACGCTTCGCTTGCTTTACAAACAATTTCAAAGCAATTTCGGTGCTTGAAAGATGCAATATGTACACAAATTAAAGCCACTGGGAAAAGCTTGGGCGAAGAGGATTGGTTGGGTGGCAAAATTGAAGGGTCGAGATTGAGATACGTGGACCATCATCTACGGCAGCAAAGAGCTTTGCAACAATTGGGAATGATTCAACACAACACTTGGAGACCCCAGAGAGGTTTGCCTGAACGTGCTGTTTCTGTTCTTCGTGCTTGGCTCTTTGAGCATTTCCTTCACCCATATCCGAAGGATTCAGACAAGATTATTCTTGCGAAGCAAACGGGACTCACAAGGAGCCAAGTCTCTAATTGGTTTATAAACGCAAGAGTTCGTCTATGGAAGCCAATGGTGGAAGAAATGTACTTGGAAGAAATCAAAGACCAAGAACAAAACGGAGATTCCCACGACATGAACAGAAACAACAAAAACGAACCCAACAAACAACATGGTGGAGCTGGAGGAGATCAAAACAACAATGCATCAGAGTCTCTCAAACTAAACCACCAGATGAACGATCCACAATCCAAGACAGAGAATTTAAACAACAACAACAATTCTCTCACCGATCACGTTTCGAATTCTTCAATGTCATCATCCTCGATGTTGGGATCCTTACAAACTCATCACTCAGGCTTCAACCTCGTACGACCATCCTCCGACATCCTCTCGAGTCCCAAAAAACCAAGAACCACAAACAACCTCGAAACCCCATTATCCACAAAAACCATGCTTTTAAGAGACATTAATGACACGAAACACCTTCAGATGACAGAGATGAACATGAACAACAACAACAACAATCATGGCGGCGGATTTGGTTCCTACCCAATTGGTGAAATTGGATCGAGGTTCAATTCTGAGCTTTTGACGCCAAGATTCCATGGAAATGGCGTCTCTCTCACTCTTGGCCTTCCCCATTCAGATAATCTCTCTCTTTCAGGAACCCAACAAAATTACCTATCCAACCGAAACCTTCAGTTGGGGAGAAGGGTTGATATCATCAACGCCGGACCTGATTTCTCCGACGTCAATCCCGCCCCGCCGCCTCATTCCGTGTCGACTGGCTACGACAGCGTCGAAATACAAACGACGAAAAGGTTCGCTGCCCAATTATTGCCTGATTTTGTCGCTTGA 2085 49.5 MATYFHGGSEIQANSDGIHTLYLMNPNYVPYSDTHSQTPPNMLFLNPSGHALTPSTLPTRRLPTTTSSEFLSPPPTLLVPPTLLNPTTRSQPSTPSQLSASTTISGLLWTNPPTESPPCRPPPTPPIWASAARRHSREIQGGGSGGGGGGGAPAISPTSGDEIRVSGNSPTSVSVVSSGITGVQSVILGSKYLKAAQELLDEVVNVGKGNNKTDKGDGTKDKMKMKKESTAAVAEPSAAGAESTSKPAPELSTAQRQDLQMKKAKLIGMLDEVEQKYRQYHQQMQAVVCSFEQAAGLGSAKSYASLALQTISKQFRCLKDAICTQIKATGKSLGEEDWLGGKIEGSRLRYVDHHLRQQRALQQLGMIQHNTWRPQRGLPERAVSVLRAWLFEHFLHPYPKDSDKIILAKQTGLTRSQVSNWFINARVRLWKPMVEEMYLEEIKDQEQNGDSHDMNRNNKNEPNKQHGGAGGDQNNNASESLKLNHQMNDPQSKTENLNNNNNSLTDHVSNSSMSSSSMLGSLQTHHSGFNLVRPSSDILSSPKKPRTTNNLETPLSTKTMLLRDINDTKHLQMTEMNMNNNNNNHGGGFGSYPIGEIGSRFNSELLTPRFHGNGVSLTLGLPHSDNLSLSGTQQNYLSNRNLQLGRRVDIINAGPDFSDVNPAPPPHSVSTGYDSVEIQTTKRFAAQLLPDFVA 694
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 45532646 45536150 + Lag0010224.1 Lac9g2737 621663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac9g2737 694 Pfam Associated with HOX 186 322 IPR006563 -
Lac9g2737 694 ProSiteProfiles 'Homeobox' domain profile. 369 432 IPR001356 GO:0003677(InterPro)
Lac9g2737 694 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 132 473 IPR050224 GO:0000978(PANTHER)|GO:0000981(PANTHER)|GO:0006357(PANTHER)
Lac9g2737 694 Pfam Homeobox KN domain 389 428 IPR008422 GO:0003677(InterPro)|GO:0006355(InterPro)
Lac9g2737 694 SMART prehox3 181 324 IPR006563 -
Lac9g2737 694 MobiDBLite consensus disorder prediction 461 522 - -
Lac9g2737 694 FunFam BEL1-like homeodomain protein 9 375 437 - -
Lac9g2737 694 CDD homeodomain 372 433 IPR001356 GO:0003677(InterPro)
Lac9g2737 694 MobiDBLite consensus disorder prediction 213 229 - -
Lac9g2737 694 SMART HOX_1 372 436 IPR001356 GO:0003677(InterPro)
Lac9g2737 694 MobiDBLite consensus disorder prediction 445 460 - -
Lac9g2737 694 SUPERFAMILY Homeodomain-like 373 438 IPR009057 -
Lac9g2737 694 Coils Coil 256 283 - -
Lac9g2737 694 Gene3D - 367 446 - -
Lac9g2737 694 MobiDBLite consensus disorder prediction 132 169 - -
Lac9g2737 694 MobiDBLite consensus disorder prediction 445 522 - -
Lac9g2737 694 MobiDBLite consensus disorder prediction 533 552 - -
Lac9g2737 694 MobiDBLite consensus disorder prediction 208 257 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac1g1960 Lac-Chr1:41193495 Lac9g2737 Lac-Chr9:45532646 4.90E-37 dispersed
Lac9g1723 Lac-Chr9:36821664 Lac9g2737 Lac-Chr9:45532646 2.30E-80 dispersed
Lac10g2756 Lac-Chr10:42068568 Lac9g2737 Lac-Chr9:45532646 1.30E-139 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
24524 PF07526 POX 8.50E-49 No_clan Lac TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac9g2737 - - - 0.0