Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac9g2746 ATGTCACTGGACATGATGGCATCAGAACGTGTTTGTTATGTTCACTGCAACTTCTGCAACACCATTTTAGCGGTAAGTGTTCCATGCAACAGCATGTTCACTCTCGTGACTGTGAGATGTGGGCATTGTTCAAATTTGCTGTCTGTAAACATGGGTGCTTCTCTCCAAGTTGTTCCTCCTCAAGATTCCCAACAGGGTCACAAACAGCAGCAAGTGAGCACTGGAGATTCGAGCAGGGACAGAGGTTCTTCTTCTAAATGCAGTAAAATCAGCCCTCTTGATTCTGCTGAACGTGACCAACACAGAATCCCTCCTATTCGCCCACCGGAGAAAAGACAGCGTGTTCCATCTGCATATAATAGGTTCATCAAAGAGGAAATCCAAAGGATTAAGGCTAATAATCCTGACATAAGCCACAGAGAAGCCTTTAGCACAGCAGCTAAAAATTGGGCACATTTTCCTCACATCCACTTTGGGCTGAAGCTGGATGGAAATAAGCAAACAAATTAA 510 44.31 MSLDMMASERVCYVHCNFCNTILAVSVPCNSMFTLVTVRCGHCSNLLSVNMGASLQVVPPQDSQQGHKQQQVSTGDSSRDRGSSSKCSKISPLDSAERDQHRIPPIRPPEKRQRVPSAYNRFIKEEIQRIKANNPDISHREAFSTAAKNWAHFPHIHFGLKLDGNKQTN 169
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 45626609 45631947 - Lag0010233.1 Lac9g2746 621672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac9g2746 169 FunFam Axial regulator YABBY 105 169 - -
Lac9g2746 169 CDD HMG-box_SF 114 150 - -
Lac9g2746 169 PANTHER PROTEIN YABBY 6-RELATED 6 167 IPR006780 GO:0005634(PANTHER)|GO:0007275(InterPro)|GO:0010158(PANTHER)|GO:0045165(PANTHER)
Lac9g2746 169 SUPERFAMILY HMG-box 105 153 IPR036910 -
Lac9g2746 169 MobiDBLite consensus disorder prediction 58 91 - -
Lac9g2746 169 MobiDBLite consensus disorder prediction 92 109 - -
Lac9g2746 169 Pfam YABBY protein 7 160 IPR006780 GO:0007275(InterPro)
Lac9g2746 169 MobiDBLite consensus disorder prediction 58 117 - -
Lac9g2746 169 Gene3D High mobility group box domain 96 155 IPR036910 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac11g2250 Lac-Chr11:38533276 Lac9g2746 Lac-Chr9:45626609 1.20E-44 dispersed
Lac13g0386 Lac-Chr13:2745920 Lac9g2746 Lac-Chr9:45626609 7.00E-18 dispersed
Lac3g0792 Lac-Chr3:6309430 Lac9g2746 Lac-Chr9:45626609 1.30E-49 dispersed
Lac5g0469 Lac-Chr5:5300588 Lac9g2746 Lac-Chr9:45626609 2.00E-14 dispersed
Lac6g1318 Lac-Chr6:13612793 Lac9g2746 Lac-Chr9:45626609 1.30E-25 dispersed
Lac9g2746 Lac-Chr9:45626609 Lac6g2925 Lac-Chr6:46896306 1.40E-50 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
24525 PF04690 YABBY 1.20E-73 CL0114 Lac TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac9g2746 K25796 - csv:101222154 311.997