Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac9g2749 ATGAGGAAGAAGCTCGATACTCGTTTTCCAGCCGCTCGGATAAAGAAGATTATGCAGGCTGATGAAGATGTAGGGAAGATTGCTATGGCAGTCCCTCTTTTAGTCTCAAAGGCTCTGGAACTATTTTTACAAGATTTATGTGACAGGACATATGAGATCACCCTGAAGAGGGGGGCTAAGACAATGAACTCTTTGCACTTAAAACAATGCATACAGACGTTTAATGTTTTTGATTTCTTGAGGGATGTTGTGGGCAAGGTTCCTGATTTAGGTGGTTCTGATGCTGCTGGGGAGGATCGTTGTATTTCCAAAAGAAGGAAAGTTGTAGATGAGGATGGTGGTAATGACAGTGAAGAAGAGTCCAAAAGGATTAAGATGACGGAGGCTGGTCATAATATTAGTGGCAGAGGAAGGGGTAGAGGTAGAGGTAGAGGTCGTGGGCGTAGTAGACACATGGAGAAGGATACAGCTATACATTATGATAACTTCGAAGATGATTTGGAAATTCCTAATCATCCTTGTGACAAGCTCAACAAAACTGTGCCAGATAACGGTGTAGCAGAAGTTCGAATAGGGAACGATAATATGTCTGGTGACAAAGCTGGAGAACCATCAGTTCGGAACTTCGACTTGAATGTAAACTTGGAAGAAGATGGGGACTCGACTACAATTCCAGTGGCTGCTTCTACAGCTTCACCGATAAAGCCCCCGACTGACTCGAAACATGATGAATACCCCGGATGGTCAGTGGCTGAAATGGAAAAGATGGCTATTGATCCAATTCAACTAGCCAATTTGAATAAGACTATAGATGATGAGGAAGATTATGACGAAGAAGGCTAG 843 43.06 MRKKLDTRFPAARIKKIMQADEDVGKIAMAVPLLVSKALELFLQDLCDRTYEITLKRGAKTMNSLHLKQCIQTFNVFDFLRDVVGKVPDLGGSDAAGEDRCISKRRKVVDEDGGNDSEEESKRIKMTEAGHNISGRGRGRGRGRGRGRSRHMEKDTAIHYDNFEDDLEIPNHPCDKLNKTVPDNGVAEVRIGNDNMSGDKAGEPSVRNFDLNVNLEEDGDSTTIPVAASTASPIKPPTDSKHDEYPGWSVAEMEKMAIDPIQLANLNKTIDDEEDYDEEG 280
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 45668200 45672263 + Lag0010236.1 Lac9g2749 621675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac9g2749 280 Gene3D Histone, subunit A 1 86 IPR009072 GO:0046982(InterPro)
Lac9g2749 280 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 4 170 IPR050568 GO:0001046(PANTHER)|GO:0005634(PANTHER)|GO:0016251(PANTHER)
Lac9g2749 280 FunFam dr1-associated corepressor homolog 1 86 - -
Lac9g2749 280 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 8 71 IPR003958 -
Lac9g2749 280 SUPERFAMILY Histone-fold 3 89 IPR009072 GO:0046982(InterPro)
Lac9g2749 280 MobiDBLite consensus disorder prediction 131 152 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac13g0807 Lac-Chr13:6477195 Lac9g2749 Lac-Chr9:45668200 5.70E-54 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
24526 PF00808 CBFD_NFYB_HMF 1.40E-18 CL0012 Lac TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac9g2749 K21752 - csv:101204606 466.848