Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lac9g2754 | ATGGCGGCTCGAGCTGTTGTTCCTCAGCGACAACTACGAATCAGAGGTGAAGGTAAGCCGAAGATGGTAGCGGCTGAAGGAAGAACAAGGCGAGTTCTTCAAGATATAGGCAATCTGGTGCCTGATCGAGCCGCAGTAGAAGGGAAACCTGGACCTCAACCTGCCGAGAAGAACAAGAGAGCAATCACCCAAAAGCTGGATGGGGGAGTAGACAAGGGAGGCGATGTGACGAAGGCTGCAATAACTGAGAAGTGCAAAGCTGAGAAACCTAAGACTGTACTCAGCTCTGCCGACAAGAGACATATAATCAACATCAGCGACAGTAAATCAAGGGATAAGAATAAGAGGACTCTGACTTCAACCCTTAGTGCCAGAAGCAAGGCTGCTTGTGGACTCACCAATAATCCACTGGATTCAGTAGCTAACATTGATGAAGCAGATGCTAACAATGAATTGGCAGTAGTTGAATACATCGACGACATGTACAAGTTTTACAAGCTTGCAGAAGATGAGAGCCGAGTATCAGATTACATGGGATCACAGCCAGATTTGAATGCTAAGATGAGATCCATCCTCATAGATTGGTTGATAGAAGTTCATCGCAAGTTCGAACTGATGCCAGAAACCCTTTACCTCGCTGTAAACATTGTAGACCGATTCCTTTCCTTGAAGACTGTACCAAGGAGGGAACTTCAATTGGTAGGTATCAGCTCTATGCTGATAGCATGCAAATATGAAGAGATTTGGGCCCCAGAGGTCAATGACTTTGTGAGTATATCTGCAAATACTTATCAGAGAGAACAGATTTTGGTGATGGAGAAAGTAATCTTGGGCAGGCTAGAATGGCTTCTAACAGTTCCTACACCTTACGTTTTTCTTGTTCGATATGTAAAGGCTTCCGAACCGTCTGATGAGGAGATGGAGCACATGGTCTTTTTTCTGGCTGAGCTTGGTCTGATGAACTATCCCATAACAATATCATACAGCCCTTCAGCGATTGCTTCAGCGGCTGTTTATGCTGCACGATGCACACTTGAAAAGAGCCCTCTCTGGACAGCAACTTTGCAACACCATACAGGCTACGTTGAAGATGAGTTGAAGGAATGTGCAGAACTTCTTGTGAACTTGCACCGTGGAGCTGTAGATTGCAAGCTCAAGGCTGTGTATAGAAAGTATACGAGTCCGGATCGCAGTGCAGTTGCTCTTTTTCCTCCAGCTAAAAGTCTAACTCCAGATCGTAGTACAGATGCATGA | 1254 | 45.37 | MAARAVVPQRQLRIRGEGKPKMVAAEGRTRRVLQDIGNLVPDRAAVEGKPGPQPAEKNKRAITQKLDGGVDKGGDVTKAAITEKCKAEKPKTVLSSADKRHIINISDSKSRDKNKRTLTSTLSARSKAACGLTNNPLDSVANIDEADANNELAVVEYIDDMYKFYKLAEDESRVSDYMGSQPDLNAKMRSILIDWLIEVHRKFELMPETLYLAVNIVDRFLSLKTVPRRELQLVGISSMLIACKYEEIWAPEVNDFVSISANTYQREQILVMEKVILGRLEWLLTVPTPYVFLVRYVKASEPSDEEMEHMVFFLAELGLMNYPITISYSPSAIASAAVYAARCTLEKSPLWTATLQHHTGYVEDELKECAELLVNLHRGAVDCKLKAVYRKYTSPDRSAVALFPPAKSLTPDRSTDA | 417 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 45728656 | 45731115 | + | Lag0010241.1 | Lac9g2754 | 621680 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lac9g2754 | 417 | Gene3D | - | 174 | 285 | - | - | |
Lac9g2754 | 417 | FunFam | G2/mitotic-specific cyclin | 173 | 281 | - | - | |
Lac9g2754 | 417 | SUPERFAMILY | Cyclin-like | 149 | 282 | IPR036915 | - | |
Lac9g2754 | 417 | Pfam | Cyclin, N-terminal domain | 160 | 284 | IPR006671 | - | |
Lac9g2754 | 417 | SMART | cyclin_7 | 291 | 375 | IPR013763 | - | |
Lac9g2754 | 417 | SMART | cyclin_7 | 194 | 278 | IPR013763 | - | |
Lac9g2754 | 417 | CDD | CYCLIN_AtCycB-like_rpt1 | 138 | 282 | - | - | |
Lac9g2754 | 417 | ProSitePatterns | Cyclins signature. | 189 | 220 | IPR048258 | - | |
Lac9g2754 | 417 | Pfam | Cyclin, C-terminal domain | 287 | 405 | IPR004367 | - | |
Lac9g2754 | 417 | FunFam | G2/mitotic-specific cyclin-1 | 282 | 401 | - | - | |
Lac9g2754 | 417 | SUPERFAMILY | Cyclin-like | 288 | 409 | IPR036915 | - | |
Lac9g2754 | 417 | Gene3D | - | 160 | 401 | - | - | |
Lac9g2754 | 417 | SMART | Cyclin_C_2 | 287 | 406 | IPR004367 | - | |
Lac9g2754 | 417 | PANTHER | CYCLINS | 141 | 393 | IPR039361 | GO:0000079(PANTHER)|GO:0000307(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0016538(PANTHER)|GO:0044772(PANTHER) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lac12g0033 | Lac-Chr12:483460 | Lac9g2754 | Lac-Chr9:45728656 | 7.20E-62 | dispersed | |
Lac1g1551 | Lac-Chr1:36801481 | Lac9g2754 | Lac-Chr9:45728656 | 2.80E-111 | dispersed | |
Lac2g0092 | Lac-Chr2:703334 | Lac9g2754 | Lac-Chr9:45728656 | 4.80E-65 | dispersed | |
Lac8g1821 | Lac-Chr8:36495788 | Lac9g2754 | Lac-Chr9:45728656 | 7.80E-46 | dispersed | |
Lac9g2754 | Lac-Chr9:45728656 | Lac2g0633 | Lac-Chr2:4734814 | 3.20E-45 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lac9g2754 | K21777 | - | csv:101222873 | 678.322 |