Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac9g2757 ATGAAATATTGCCTTGATGCTGTGGCTGTAACAAGATTGGTGATTTTTGTGTCAGCTTTTGCAGCCATCTTTGCAGCTTCACCACCAGTTCCGTCGGACAAGTCGCAACTAAACAATTGGTTTTCCGAAAACGTGAAGCCCTTTGCCGGTCGCAAGGCGGAGCTTGATCCGGCCCTCGTCGCCGCCGAAGAAAAAGCCACCGTCGTCAAAGTAATGGCCGACGGAAGTGGAGATTTCAAGACGATCACCGAAGCCATTGCCAGCGTTCCAGCAGATAACAAGAATCGCGTTGTGATTTGGATCGGAGGAGGCGTTTATAAAGAGAAGCTCAAGATCGATAGAAACAAGCCATTCGTTACTCTATATGGCTCTCCTAATAACATGCCTAATGTGACATTCGACGGCGATGCCGCCAAATACGGCACCGTTTACAGTGCAACTTTGATCGTCGAGTCCGATTACTTCACCGCTGCCAATCTCGTCATCGAGAATTCATCACCAAGGCCAGATGGGGTGAGAAAAGGAGCACAGGCATTAGCAGCCAGACTAATGGGGACTAAAGCGGCTGTTTACAATTGCAAATTCATTGGGTTTCAAGACACTCTTTGCGACGACGACGGTTTGCATCTCTACAAGGATTGCTTCATTCAAGGGAATGTGGACTTCATTTTCGGAAAAGGAACCTCCCTTTACTTGAACACTCAATTGGATGTGGTGGGAGACGGGGGATTGGCAGTGATAGCAGCACATTCAAGAGAACAAGAATCAGACCCAAGTGGATATTCATTTGTGCATAGCAGCATTACAGGAACTGGCGGCAAAAACACTTACTTGGGAAGGGCTTGGATGGCCAGGTCCAGAACTGTCTTTGCCTACACCACAATGGCCGACATTATTCACCCTGCAGGTTGGGATGACATGAAACATCCCGGTTACGATGCTACGGTTTTGTTCGGAGAATACAAGTGTTCGGGGCCGGGAGCCGAGCCGAGTGGGCGTGTAAAATATGCCAAGCAGTTGACTGATGTGGAAGTGAAGCCGTTCATGAGCCTTGGGTACGTGCAGAGTGACAAGTGGTTGCTTCCTCCTCCTAATCCTCAAGCTTGA 1107 48.87 MKYCLDAVAVTRLVIFVSAFAAIFAASPPVPSDKSQLNNWFSENVKPFAGRKAELDPALVAAEEKATVVKVMADGSGDFKTITEAIASVPADNKNRVVIWIGGGVYKEKLKIDRNKPFVTLYGSPNNMPNVTFDGDAAKYGTVYSATLIVESDYFTAANLVIENSSPRPDGVRKGAQALAARLMGTKAAVYNCKFIGFQDTLCDDDGLHLYKDCFIQGNVDFIFGKGTSLYLNTQLDVVGDGGLAVIAAHSREQESDPSGYSFVHSSITGTGGKNTYLGRAWMARSRTVFAYTTMADIIHPAGWDDMKHPGYDATVLFGEYKCSGPGAEPSGRVKYAKQLTDVEVKPFMSLGYVQSDKWLLPPPNPQA 368
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 45740103 45742035 + Lag0010244.1 Lac9g2757 621683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac9g2757 368 FunFam Pectinesterase 64 362 - -
Lac9g2757 368 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 32 360 - GO:0030599(PANTHER)|GO:0045490(PANTHER)|GO:0052689(PANTHER)
Lac9g2757 368 Gene3D - 62 363 IPR012334 -
Lac9g2757 368 Pfam Pectinesterase 69 355 IPR000070 GO:0030599(InterPro)|GO:0042545(InterPro)
Lac9g2757 368 SUPERFAMILY Pectin lyase-like 66 361 IPR011050 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac3g1116 Lac-Chr3:9216998 Lac9g2757 Lac-Chr9:45740103 3.70E-104 dispersed
Lac4g2556 Lac-Chr4:44735763 Lac9g2757 Lac-Chr9:45740103 2.30E-69 dispersed
Lac7g0964 Lac-Chr7:8177086 Lac9g2757 Lac-Chr9:45740103 1.50E-48 dispersed
Lac9g2756 Lac-Chr9:45736890 Lac9g2757 Lac-Chr9:45740103 1.20E-176 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac9g2757 K01051 - csv:101205095 610.912