Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac9g2808 ATGAGCGGCGGAGCAGCGAAGACTGTGTGCGTCACCGGCGCCTCTGGATACATAGCTTCTTGGATTGTTAAATTCCTTCTCCAACGAGGTTACACCGTCAAAGCCAGTGTTCGAGATCCTGCTGATCCAATCAAAACTGCCCATTTGCTTGCACTTGATGGAGCGGCTGAGAGACTTCATCTGTTTAAGGCCGACCTCCTACAGGAAGGTTCCTTTGATTCTGCTATTGAGGGTTGTGAAGGAGTTTTTCATACTGCTTCTCCCTTCTTTCATGGTGTTTCAGATCCTCAGGCTGAACTTATTGATCCAGCATTGAAAGGAACACTCAATGTTCTCAATTCAGTTGCAAAAGCATCATCTGTCAAGCGGGTTGTCTTGACATCTTCCATGGCTGCTGTTGCTTATAATGGAAAGCCTCGTACTCCTGATACAGTAGTTGATGAAACTTGGTTTTCTAAACCTGAGATTTGCAAGGAAATGAAGTTATGGTATGTGCTGTCCAAAACTTTAGCTGAGGATGCAGCCTGGAATTTTGCAAGAGAGAAAGGAATTGACTTGGTTACCATAAACCCCGCGATGGTTATCGGTCCACTATTGCAGCCAACGCTGAATACTAGTGCTGAAGCTATTCTGAACTTAATATCTGGAGCACAAACATTTCCAAATTTCACATTTGGATGGGTTAATGTCAAAGATGTGGCAAATGCACACATTCTAGCCTATGAGATTCCATCAGCCAGTGGAAGATACTGTTTGGTTGAGAAAGTTGTGCACTATTCAGGAGTTGTCAAGATTTTACATGATCTCTACCCTTCACTTCAACTTCCTGATAAGTGTGCCGATGACAAGCCGTTCACACCGACGTATCAAGTTGCGATTGAGAAAGCAAAGAGCTTAGGCATTCAATTCATTCCTCTTGAGGAAAGCCTGAAGGAAACTGTTGAGAGCTTGAAGGAAAAGAAATTCATCAGCTTCTGA 978 43.66 MSGGAAKTVCVTGASGYIASWIVKFLLQRGYTVKASVRDPADPIKTAHLLALDGAAERLHLFKADLLQEGSFDSAIEGCEGVFHTASPFFHGVSDPQAELIDPALKGTLNVLNSVAKASSVKRVVLTSSMAAVAYNGKPRTPDTVVDETWFSKPEICKEMKLWYVLSKTLAEDAAWNFAREKGIDLVTINPAMVIGPLLQPTLNTSAEAILNLISGAQTFPNFTFGWVNVKDVANAHILAYEIPSASGRYCLVEKVVHYSGVVKILHDLYPSLQLPDKCADDKPFTPTYQVAIEKAKSLGIQFIPLEESLKETVESLKEKKFISF 325
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 46174469 46177277 - Lag0010295.1 Lac9g2808 621734
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac9g2808 325 Gene3D - 7 325 - -
Lac9g2808 325 CDD FR_SDR_e 9 300 - -
Lac9g2808 325 Pfam NAD dependent epimerase/dehydratase family 9 246 IPR001509 -
Lac9g2808 325 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 8 316 IPR050425 GO:0016616(PANTHER)
Lac9g2808 325 FunFam Dihydroflavonol reductase 6 325 - -
Lac9g2808 325 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 7 318 IPR036291 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac4g2745 Lac-Chr4:46323593 Lac9g2808 Lac-Chr9:46174469 6.60E-81 dispersed
Lac7g2869 Lac-Chr7:47832551 Lac9g2808 Lac-Chr9:46174469 2.30E-75 dispersed
Lac7g2870 Lac-Chr7:47838316 Lac9g2808 Lac-Chr9:46174469 6.40E-73 dispersed
Lac9g1544 Lac-Chr9:34310336 Lac9g2808 Lac-Chr9:46174469 3.50E-33 dispersed
Lac9g2808 Lac-Chr9:46174469 Lac9g2809 Lac-Chr9:46180274 2.20E-158 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac9g2808 - - - 0.0