Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac9g2833 ATGGAGACGAGTTTGGAGTGGGATTTGGAGGAGATGAGAGAATATTTCAAAACTGGAAAAACAAAGGAGCCATCTTGGAGGATTTCTCAGCTCAAAGCTTTACAACAACTTCTTAAACAAAATGAACAACAAATTTACAGTGCTCTTATGCAAGACTTGGGAAAACACCATGCTGAAGCCTTTAGAGATGAGATTGGTACTCTGGAAAAGTCCCTCAACTTTGCTTTGGAAAATTTGAAACATTGGATGAAACCCAAAAAGGCGAAATTGCCAGCAATGGCGTTTCTGAGTTCGGCAGAAGTGGTTCCACAGCCTCTGGGTGTTGTTCTTATATTCTCATCTTGGAATTTTCCGTTCGGGTTGTCGTTGGAGCCGTTGATAGGAGCAATATCAGCCGGAAATTGCGTGTTTCTGAAGACGTCGGAGTTTGCTCCGGCGAGTTCGGCTTTGCTGGCGAAAGCCATCGGAAAATATGTGGATGGCAAGGCGGTGAGAGTGGTGGAAGGAGGGGCGGCGGCCGGCGAGCGGCTGCTGCAGCAGCGGTGGGAGAAGATTTTCTTTACAGGAAGTGGACGAGTGGGACGGATTGTGATGGCGGCAGCGGCGAAACACCTGACGCCGGTGACTTTGGAGCTGGGTGGGAAGTGCCCCGCCATTGTTGACCTTCAATCGTTTTCATTTTCATGGGACATTGAGGCTACTGCTAAACGGCTCGTGATCGGAAAATTTGGACCCTGCGCCGGACAAGCTTGCATAGCAATCGATTACGTCCTCGTTGAACACAGATTTATATCCACATTGGTCGAATTGATGAAGAAGTTCACCAAGAAATTCTTCGGTAAAAGTTCGAATCCAGAAAATAGCATGGCGAGGATCGTAAACAATCAAAATTTCTTGAGATTGAAGAATCTGGTGGACGAACCTGCTGTTCGAGCATCGATTGTCTATGGAGGAACCATGGACGAAGACAAATTGTTTGTTGAGCCAACTATTCTGTTAAATCCACCAAACGATGCAGAAATTATGAGGGATGAAATCTTTGGACCATTCCTTCCCATAATTGGAGTGGACAAGATTGAAGACAGTATAGATTTCATCAATTCAAGGCCTAAGCCTCTCGCCCTTTATGCCTTCACAAAAGATAAAGCTCTCCAAAGAAGACTCGTCTCAGAAACTTCGTCCGGCAGCTTGACATTTAATGATACAATTGTTCAGTATGCAGCCGATTCACTCCCATTTGGAGGGGTTGGTGAAAGTGGGATTGGGAGATACCATGGAAAATTCTCATTTGACACCTTTAGTCATGAAAAGGCAATTCTGAAGAGGGACTTCTTGTTGGACTTCTGGTTCAGATATCCACCATGGAACAATCACAAGCTTCAGCTGCTTAGAGAAGCTTACAACTTTAACTATTTTCAGTTAGTCCTCACTGTTTTGGGTCTCAAAAGGTCTTAA 1455 45.02 METSLEWDLEEMREYFKTGKTKEPSWRISQLKALQQLLKQNEQQIYSALMQDLGKHHAEAFRDEIGTLEKSLNFALENLKHWMKPKKAKLPAMAFLSSAEVVPQPLGVVLIFSSWNFPFGLSLEPLIGAISAGNCVFLKTSEFAPASSALLAKAIGKYVDGKAVRVVEGGAAAGERLLQQRWEKIFFTGSGRVGRIVMAAAAKHLTPVTLELGGKCPAIVDLQSFSFSWDIEATAKRLVIGKFGPCAGQACIAIDYVLVEHRFISTLVELMKKFTKKFFGKSSNPENSMARIVNNQNFLRLKNLVDEPAVRASIVYGGTMDEDKLFVEPTILLNPPNDAEIMRDEIFGPFLPIIGVDKIEDSIDFINSRPKPLALYAFTKDKALQRRLVSETSSGSLTFNDTIVQYAADSLPFGGVGESGIGRYHGKFSFDTFSHEKAILKRDFLLDFWFRYPPWNNHKLQLLREAYNFNYFQLVLTVLGLKRS 484
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 46347141 46351651 + Lag0010320.1 Lac9g2833 621759
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac9g2833 484 PIRSF ALDH 1 479 IPR012394 GO:0006081(InterPro)
Lac9g2833 484 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 214 419 IPR016163 GO:0016620(InterPro)
Lac9g2833 484 PANTHER ALDEHYDE DEHYDROGENASE 5 481 IPR012394 GO:0004029(PANTHER)|GO:0005737(PANTHER)|GO:0006081(PANTHER)|GO:0006081(InterPro)
Lac9g2833 484 FunFam Aldehyde dehydrogenase 13 226 - -
Lac9g2833 484 Pfam Aldehyde dehydrogenase family 11 438 IPR015590 GO:0016491(InterPro)
Lac9g2833 484 SUPERFAMILY ALDH-like 10 457 IPR016161 GO:0016491(InterPro)
Lac9g2833 484 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 13 437 IPR016162 GO:0016491(InterPro)
Lac9g2833 484 FunFam Aldehyde dehydrogenase 214 419 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac5g2068 Lac-Chr5:39221682 Lac9g2833 Lac-Chr9:46347141 5.00E-167 dispersed
Lac9g2833 Lac-Chr9:46347141 Lac11g0932 Lac-Chr11:10144511 2.30E-34 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac9g2833 K00128 - csv:101205263 782.326