Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac9g2882 ATGTCGTGGTTTAAAGTTGTAGCTTTAGTTATCTTTGTTTGTATGTTGTCGTTGAGGGGTTCTTGGGCTCAGCTCAGCCCTACCTTCTACGACCAAACATGCCCCAATCTAACCGCGGTGGTCAATGAGGCAATAAGCCAGGCATTGCAGGGAGATGTTCGAGCTGGAGCCAAGCTCATTCGCTTTCACTTCCACGACTGCTTTGTCAACGGTTGTGATGGATCGGTTCTATTAGAGAATGCAGATGGGATAGAGAGTGAGTTAGATGCTCCTGGGAATCAAGGAATACAAGGTTTCGACATCGTCGACAACATCAAAACTGCAGTAGAAGGTGCCTGCCCCAACACCGTGTCTTGTGCCGATATCTTAGCCATTGCATCTCGTGAATCTGTCATCTTGACGGGAGGGCCGGGTTGGGAAGTTCAATTGGGAAGAAGAGATAGCCGAATAGCAAATAGATCTGGAGCTACAAGCAATCTTCCTAGCCCATTTGAAACCCTTACTCAACTTCAGCTCAAATTTGCTGCAGTTGGCCTCGATTCTACCGATCTTGTCGCTTTATCTGGAGCGCATACATTCGGTAGGTCAAGATGCAGATTCTTCAGCCGGCGGCTAAACAATTTCAACGGCACCAGCAGTCCAGACCCAACTCTAGACCCCACACTCCGGGACGCACTGATCATCGCTTGTCCGCCCGGCGACATAGACAACCGGATCGCACTTGACGTTGCCACGCCGGACGACTTCGACAATGCATATTATAGCAATCTGGTAAACAATCGTGGGCTTCTACAATCTGATCAAGAGCTCTTCTCAACCCCCGGGGCCGAAACCATCGAACCAGTCAATCGCTTTGCCAGCAATGAAACCGATTTCTTTGTTCAGTTTGGTCAGTCCATGATAAACATGGGCAACATTAGCCCTTTGACCGGAACCGATGGAGAAATTAGGTCAAGTTGTAGGCGCGTTAATCCTTTGCAGAATAGGGCTGTTATGTGA 999 48.75 MSWFKVVALVIFVCMLSLRGSWAQLSPTFYDQTCPNLTAVVNEAISQALQGDVRAGAKLIRFHFHDCFVNGCDGSVLLENADGIESELDAPGNQGIQGFDIVDNIKTAVEGACPNTVSCADILAIASRESVILTGGPGWEVQLGRRDSRIANRSGATSNLPSPFETLTQLQLKFAAVGLDSTDLVALSGAHTFGRSRCRFFSRRLNNFNGTSSPDPTLDPTLRDALIIACPPGDIDNRIALDVATPDDFDNAYYSNLVNNRGLLQSDQELFSTPGAETIEPVNRFASNETDFFVQFGQSMINMGNISPLTGTDGEIRSSCRRVNPLQNRAVM 332
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 46745675 46747585 + Lag0010369.1 Lac9g2882 621808
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac9g2882 332 PRINTS Plant peroxidase signature 182 194 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac9g2882 332 PRINTS Plant peroxidase signature 298 311 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac9g2882 332 PRINTS Plant peroxidase signature 256 273 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac9g2882 332 PRINTS Plant peroxidase signature 116 126 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac9g2882 332 PRINTS Plant peroxidase signature 240 255 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac9g2882 332 PRINTS Plant peroxidase signature 97 110 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac9g2882 332 PRINTS Plant peroxidase signature 135 150 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac9g2882 332 PRINTS Plant peroxidase signature 58 78 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac9g2882 332 PRINTS Plant peroxidase signature 34 53 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac9g2882 332 SUPERFAMILY Heme-dependent peroxidases 24 325 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac9g2882 332 Gene3D - 29 324 - -
Lac9g2882 332 CDD secretory_peroxidase 24 323 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Lac9g2882 332 PRINTS Haem peroxidase superfamily signature 135 147 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac9g2882 332 PRINTS Haem peroxidase superfamily signature 183 198 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac9g2882 332 PRINTS Haem peroxidase superfamily signature 242 257 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac9g2882 332 PRINTS Haem peroxidase superfamily signature 56 70 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac9g2882 332 PRINTS Haem peroxidase superfamily signature 117 134 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac9g2882 332 PANTHER PEROXIDASE 72-RELATED 9 323 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac9g2882 332 FunFam Peroxidase 161 303 - -
Lac9g2882 332 FunFam Peroxidase 28 173 - -
Lac9g2882 332 ProSiteProfiles Plant heme peroxidase family profile. 24 324 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac9g2882 332 Pfam Peroxidase 41 288 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac9g2882 332 Gene3D Peroxidase, domain 2 161 303 - -
Lac9g2882 332 ProSitePatterns Peroxidases proximal heme-ligand signature. 183 193 IPR019793 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac11g1712 Lac-Chr11:31035587 Lac9g2882 Lac-Chr9:46745675 1.30E-121 dispersed
Lac9g2882 Lac-Chr9:46745675 Lac9g2891 Lac-Chr9:46801022 1.40E-112 dispersed
Lac9g2881 Lac-Chr9:46741595 Lac9g2882 Lac-Chr9:46745675 3.60E-84 tandem
Lac9g2882 Lac-Chr9:46745675 Lac9g2883 Lac-Chr9:46755861 1.70E-118 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac9g2882 K00430 - csv:101217743 522.316