Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac9g2883 ATGGCTTCCAATTTCACACTACTCTTGCCCTTCTTCTGCTTTGTGGGTTTGATGGTGGGAGGCTCCTTGGCTCAGCTAAGCCCTTCATTTTACGCCAAATCATGTCCTAATTTAGCCAAGATTGTAAACGGCGTGGTCGCACAAGCACTGCGAACCGACGCTCGAGCTGGAGCTAAGCTCATTCGCCTCCACTTCCACGACTGCTTTGTCGATGGGTGTGATGCGTCTGTTTTGTTAGAGAACGCACCTGGCATAGAGAGTGAGCTAGATGCCCCTGGAAATCAGGGTATTCAAGGTCTTAACATCGTCGACGACATCAAATCCGCTGTCGAAAAGGCTTGCCCACGCACTGTCTCCTGTGCCGACATCTTAACCATTGCATCCAAAGAATCTGTCGTTTTGGCTGGAGGGCCGAGCTGGATTGTGCCACTGGGACGGAGAGACAGTAGAACAGCCAATAGAGATGGAGCCTCAAACAACCTTGCCAGTCCCTTCGAAGACCTCAATGGACTCAAAGCCAAGTTCGCTGCTTTTGGCCTCGATTCTACTGATCTCGTTGCTTTGTCTGGAGCGCATACGTTCGGGCGTTCAAGATGCGGATTTTTCAGCCATCGATTTGCGAACTTCAACGGGACGAACAGGCCAGATCCAACACTAGACCCAGCGTACAGAGAGCAGCTCCGGAGGCTGTGCTCAAGCTCAGAGACACGAGCCAATTTCGACCCGACGACCCCAGACAAGTTCGACAAAAACTATTACACCAACCTTCAGGGCCTTCGCGGGCTTCTTCAGAGCGACCAGGAACTGTTCTCGACTCGCGGGGCTGACACGGTCGCCATCGTCAACCGTTTTGCCAAAAGCCAGGATGAGTTCTTCAAAAGCTTTGGTCTGTCCATGATCAAAATGGGAAACATCACCCCTTTAACTGGAAGGAGAGGAGAGATCAGATTCAACTGTAGGAGGGTTAATCCATCAAGGCGCGATGATGGTCATGATGTTATGTAA 1005 51.14 MASNFTLLLPFFCFVGLMVGGSLAQLSPSFYAKSCPNLAKIVNGVVAQALRTDARAGAKLIRLHFHDCFVDGCDASVLLENAPGIESELDAPGNQGIQGLNIVDDIKSAVEKACPRTVSCADILTIASKESVVLAGGPSWIVPLGRRDSRTANRDGASNNLASPFEDLNGLKAKFAAFGLDSTDLVALSGAHTFGRSRCGFFSHRFANFNGTNRPDPTLDPAYREQLRRLCSSSETRANFDPTTPDKFDKNYYTNLQGLRGLLQSDQELFSTRGADTVAIVNRFAKSQDEFFKSFGLSMIKMGNITPLTGRRGEIRFNCRRVNPSRRDDGHDVM 334
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 46755861 46757707 + Lag0010370.1 Lac9g2883 621809
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac9g2883 334 Gene3D Peroxidase, domain 2 162 302 - -
Lac9g2883 334 FunFam Peroxidase 162 302 - -
Lac9g2883 334 PANTHER PEROXIDASE 72-RELATED 15 322 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac9g2883 334 Pfam Peroxidase 43 287 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac9g2883 334 CDD secretory_peroxidase 25 322 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Lac9g2883 334 PRINTS Haem peroxidase superfamily signature 57 71 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac9g2883 334 PRINTS Haem peroxidase superfamily signature 184 199 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac9g2883 334 PRINTS Haem peroxidase superfamily signature 136 148 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac9g2883 334 PRINTS Haem peroxidase superfamily signature 118 135 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac9g2883 334 PRINTS Haem peroxidase superfamily signature 241 256 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac9g2883 334 PRINTS Plant peroxidase signature 35 54 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac9g2883 334 PRINTS Plant peroxidase signature 136 151 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac9g2883 334 PRINTS Plant peroxidase signature 239 254 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac9g2883 334 PRINTS Plant peroxidase signature 59 79 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac9g2883 334 PRINTS Plant peroxidase signature 98 111 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac9g2883 334 PRINTS Plant peroxidase signature 255 272 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac9g2883 334 PRINTS Plant peroxidase signature 183 195 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac9g2883 334 PRINTS Plant peroxidase signature 297 310 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac9g2883 334 PRINTS Plant peroxidase signature 117 127 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac9g2883 334 SUPERFAMILY Heme-dependent peroxidases 25 324 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac9g2883 334 Gene3D - 30 323 - -
Lac9g2883 334 ProSitePatterns Peroxidases active site signature. 57 68 IPR019794 GO:0004601(InterPro)
Lac9g2883 334 FunFam Peroxidase 29 174 - -
Lac9g2883 334 ProSiteProfiles Plant heme peroxidase family profile. 25 323 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac9g2883 334 ProSitePatterns Peroxidases proximal heme-ligand signature. 184 194 IPR019793 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac9g2303 Lac-Chr9:42385509 Lac9g2883 Lac-Chr9:46755861 1.50E-64 dispersed
Lac9g2883 Lac-Chr9:46755861 Lac9g2891 Lac-Chr9:46801022 3.20E-128 dispersed
Lac9g2882 Lac-Chr9:46745675 Lac9g2883 Lac-Chr9:46755861 1.70E-118 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac9g2883 K00430 - csv:101211507 553.132