Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac9g2885 ATGGCTTCCCCTAAATTTACAGCCTTTGTTGTGGTCGTAGCTTTGATGCTGGGCACCTCTCACGCGCTTAACCCTTTCTTCTACGCCTTCTCATGCCCTCAGCTTCCTTTTGTTGTTCTAGACGTGGTCTCGCAAGCTCTACAAACCGATGACCGAGCAGCCGCCAAGCTCATTCGTCTCCACTTTCACGACTGCTTCGCCAATGGTTGTGATGGGTCTGTGTTACTGGAGGACGTACCGGGTGTGATCGACAGTGAACTAAATGCAGGTGGAAACAACGGTATCCAAGGGCTCGATATTGTGGACAACATCAAAGCTGCAGTTGAAAGGGCTTGCCCAGGCGTTGTTTCCTGTGCTGACATCTTAGCCCTCGCCTCTCAAGTTTCTGTCGTATTGTCTGGTGGGCCGGCTTGGGTGGTTCTACTGGGAAGAAAAGACAGCAGAATAGCCAACAGAGCCGCAGCCGAAAATCTTCCGAGTCCGTTCGAGACGCTGGATGTGCTGAAAGCGAAATTCGCAGCGTTTGGGCTTGATTCTACGGACCTGGTGACTCTGTCAGGAGCGCACACGTTCGGTCGATCCAGATGCCTTTTCTTCAACGGACGGTTCGACAACTTCAACAACACGGGGCTCCCAGATCCGACTCTGGACGCTGCTTACAGAGAGCAGCTTCGTGCAGCCTGCAGCACTCCAACGACACGAGTAAACTTTGACCCAGTCACACCAGTCACATTCGACAAAAACTACTACATCAATCTTAGAAACCACAAGGGGCTTCTCCAAAGTGACCAAGAGCTTTTCTCCACGCCTGGGGCTGATACCATTCCCATTGTCAACACATTTGCCGCAAGCCAGCTTCTCTTCTTTATTCAATTTGGGAATTCCATGATCAAGATGGGCAATCTCGGCCCTCCACCTGGCACCCCATCCGAAGTCAGATTGAACTGTAGAGTGGTCAACCCACCCACTGCCTCCCATGATGTTATGTAA 990 51.52 MASPKFTAFVVVVALMLGTSHALNPFFYAFSCPQLPFVVLDVVSQALQTDDRAAAKLIRLHFHDCFANGCDGSVLLEDVPGVIDSELNAGGNNGIQGLDIVDNIKAAVERACPGVVSCADILALASQVSVVLSGGPAWVVLLGRKDSRIANRAAAENLPSPFETLDVLKAKFAAFGLDSTDLVTLSGAHTFGRSRCLFFNGRFDNFNNTGLPDPTLDAAYREQLRAACSTPTTRVNFDPVTPVTFDKNYYINLRNHKGLLQSDQELFSTPGADTIPIVNTFAASQLLFFIQFGNSMIKMGNLGPPPGTPSEVRLNCRVVNPPTASHDVM 329
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 46768780 46769918 + Lag0010372.1 Lac9g2885 621811
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac9g2885 329 ProSitePatterns Peroxidases proximal heme-ligand signature. 181 191 IPR019793 -
Lac9g2885 329 CDD secretory_peroxidase 23 319 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Lac9g2885 329 PRINTS Plant peroxidase signature 294 307 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac9g2885 329 PRINTS Plant peroxidase signature 96 109 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac9g2885 329 PRINTS Plant peroxidase signature 236 251 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac9g2885 329 PRINTS Plant peroxidase signature 180 192 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac9g2885 329 PRINTS Plant peroxidase signature 115 125 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac9g2885 329 PRINTS Plant peroxidase signature 252 269 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac9g2885 329 PRINTS Plant peroxidase signature 32 51 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac9g2885 329 PRINTS Plant peroxidase signature 56 76 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac9g2885 329 PRINTS Plant peroxidase signature 134 149 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac9g2885 329 PRINTS Haem peroxidase superfamily signature 116 133 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac9g2885 329 PRINTS Haem peroxidase superfamily signature 181 196 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac9g2885 329 PRINTS Haem peroxidase superfamily signature 238 253 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac9g2885 329 PRINTS Haem peroxidase superfamily signature 134 146 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac9g2885 329 PRINTS Haem peroxidase superfamily signature 54 68 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac9g2885 329 SUPERFAMILY Heme-dependent peroxidases 23 321 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac9g2885 329 ProSiteProfiles Plant heme peroxidase family profile. 22 320 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac9g2885 329 PANTHER PEROXIDASE 72-RELATED 11 319 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac9g2885 329 FunFam Peroxidase 159 299 - -
Lac9g2885 329 ProSitePatterns Peroxidases active site signature. 54 65 IPR019794 GO:0004601(InterPro)
Lac9g2885 329 Pfam Peroxidase 41 283 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac9g2885 329 Gene3D - 27 320 - -
Lac9g2885 329 Gene3D Peroxidase, domain 2 159 299 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac9g2885 Lac-Chr9:46768780 Lac9g2887 Lac-Chr9:46776253 2.50E-133 dispersed
Lac9g2885 Lac-Chr9:46768780 Lac9g2886 Lac-Chr9:46771327 1.60E-132 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac9g2885 K00430 - csv:101211752 587.415