Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac9g2891 ATGGCCTCCTCCTCCAATGCCGTACCCTTCTTCTTCTTTCTCGCTCTTCTCTTCGGAGGCTCTCTCGCTCAACTCTCCGAAACCTTTTACGACCAAACCTGCCCTCGTCTCCCCAACATTGTCCGCGCCGCCGTCAAGAAAGCCATCGAATCCGACATCCGTGCCGGTGCTAAACTCATCCGCCTCCATTTCCACGACTGCTTCGTCAATGGCTGCGATGGCTCTGTTTTGCTCGAGGATGCTCCCGGCATAGACAGTGAGCTCAACTCACCCGGAAATCAAGGAATCCAAGGACTTGAAATTGTCGACGCCATTAAAACCGTCGTCGAGGCCGAATGTCCCGGAATCGTCTCCTGCGCCGACATCCTGGCTCAGGCCTCTAAGGACTCTGTCGATGTGCAAGGCGGGCCTAGTTGGAGAGTGTTATACGGAAGAAGAGACAGTAGAATAGCAAACAGAACAGGGGCCGATGCTGGCCTGGCCAGTCCCTTCGAAACACTCGACCAACTCAAAGCCAAATTCGCTGCTGTGGGTCTGAGTACCACCGACCTCGTCGCTTTATCTGGAGCGCATACGTTTGGTCGATCGAGGTGCATGTTCTTCAGCCACCGATTTGCCAACTTCAGCGGTACCGGAAGGCCAGATCCATCGCTGGACGCCAACTACAGGCGATTCCTAGAAGGGGTTTGTTCAGCAGGTGGAGAGACACGAGCCAATTTCGACCCAACAACACCCGACGTGTTCGACAAAAACTACTACACCAACCTTCAAGCCGGGAAGGGGCTTCTCCAAAGCGACCAAGAGCTGTTCTCCACTCCCGGAGCCGACACCATCGCCATTGTCAACAGCTTCTCCGCCAGGGAAGGCACTTTCTTCAAGGAGTTCCGGCAGTCCATGATCAACATGGGCAATATCAAGCCTTTGACTGGCCGCCGTGGGGAAATCAGAAGAAACTGTAGAAGGGTCAACGCCGCCTTGGGCGGAGAAGGCCACGATGTTATGTAA 1005 54.73 MASSSNAVPFFFFLALLFGGSLAQLSETFYDQTCPRLPNIVRAAVKKAIESDIRAGAKLIRLHFHDCFVNGCDGSVLLEDAPGIDSELNSPGNQGIQGLEIVDAIKTVVEAECPGIVSCADILAQASKDSVDVQGGPSWRVLYGRRDSRIANRTGADAGLASPFETLDQLKAKFAAVGLSTTDLVALSGAHTFGRSRCMFFSHRFANFSGTGRPDPSLDANYRRFLEGVCSAGGETRANFDPTTPDVFDKNYYTNLQAGKGLLQSDQELFSTPGADTIAIVNSFSAREGTFFKEFRQSMINMGNIKPLTGRRGEIRRNCRRVNAALGGEGHDVM 334
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 46801022 46802308 + Lag0010378.1 Lac9g2891 621817
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac9g2891 334 ProSitePatterns Peroxidases active site signature. 56 67 IPR019794 GO:0004601(InterPro)
Lac9g2891 334 Pfam Peroxidase 41 285 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac9g2891 334 Gene3D Peroxidase, domain 2 161 302 - -
Lac9g2891 334 FunFam Peroxidase 28 189 - -
Lac9g2891 334 ProSiteProfiles Plant heme peroxidase family profile. 24 323 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac9g2891 334 PRINTS Plant peroxidase signature 182 194 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac9g2891 334 PRINTS Plant peroxidase signature 34 53 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac9g2891 334 PRINTS Plant peroxidase signature 97 110 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac9g2891 334 PRINTS Plant peroxidase signature 58 78 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac9g2891 334 PRINTS Plant peroxidase signature 255 272 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac9g2891 334 PRINTS Plant peroxidase signature 116 126 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac9g2891 334 PRINTS Plant peroxidase signature 297 310 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac9g2891 334 PRINTS Plant peroxidase signature 135 150 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac9g2891 334 PRINTS Plant peroxidase signature 239 254 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac9g2891 334 Gene3D - 29 323 - -
Lac9g2891 334 CDD secretory_peroxidase 24 322 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Lac9g2891 334 FunFam Peroxidase 161 302 - -
Lac9g2891 334 PANTHER PEROXIDASE 72-RELATED 14 322 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac9g2891 334 ProSitePatterns Peroxidases proximal heme-ligand signature. 183 193 IPR019793 -
Lac9g2891 334 PRINTS Haem peroxidase superfamily signature 241 256 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac9g2891 334 PRINTS Haem peroxidase superfamily signature 117 134 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac9g2891 334 PRINTS Haem peroxidase superfamily signature 183 198 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac9g2891 334 PRINTS Haem peroxidase superfamily signature 56 70 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac9g2891 334 PRINTS Haem peroxidase superfamily signature 135 147 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Lac9g2891 334 SUPERFAMILY Heme-dependent peroxidases 24 323 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac9g2881 Lac-Chr9:46741595 Lac9g2891 Lac-Chr9:46801022 1.20E-82 dispersed
Lac9g2882 Lac-Chr9:46745675 Lac9g2891 Lac-Chr9:46801022 1.40E-112 dispersed
Lac9g2883 Lac-Chr9:46755861 Lac9g2891 Lac-Chr9:46801022 3.20E-128 dispersed
Lac9g2886 Lac-Chr9:46771327 Lac9g2891 Lac-Chr9:46801022 2.60E-106 dispersed
Lac9g2887 Lac-Chr9:46776253 Lac9g2891 Lac-Chr9:46801022 5.90E-111 dispersed
Lac9g2888 Lac-Chr9:46780560 Lac9g2891 Lac-Chr9:46801022 1.10E-136 dispersed
Lac9g2891 Lac-Chr9:46801022 Lac9g2894 Lac-Chr9:46831359 1.00E-102 dispersed
Lac9g2891 Lac-Chr9:46801022 Lac9g2893 Lac-Chr9:46816850 2.10E-103 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac9g2891 K00430 - csv:101217781 584.719