Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lac9g2955 | ATGGCCACGAGTTTGGCCCATTATCACAGACCCGAGTTTCTCACCATCGCCGTCGCTGTCGTTGCTATCGGCGTTGGCACTGCCTACTATTTCTACATCACCAAGAAATCCAAGGCCAAAGGTTGCTTGGACCCTGATAACTTCAAGGAATTTAAACTAGTTAAACGCACGCAGCTTAGCCATAATGTGGCAAAGTTCAGATTCTCTCTTCCGACGCCAACCTCAGTCTTGGGGCTGCCGATTGGGCAGCATATGAGTTGCAGAGGGAAAGATAGCAAAGGTGAAGATGTTGTGAAACCGTACACTCCAACCACTTTGGATACTGATGTTGGGTACTTCGACTTGGTCATAAAGATGTATCCACAAGGAAGGATGTCCCACCACTTTCGTGAGATGCGTGAAGGTGATTACTTGGCTGTGAAAGGTCCCAAGGGACGTTTCAAGTACGAGGCTAATGAAGTTGAGGCCTTTGGGATGCTTGCTGGAGGCACAGGCATAACTCCTATGTTCCAGGTTACAAGAGCAATACTAGAAAATCCCGTAGACCGAACTAATGTACATCTTATATATGCTAATGTTACTTATGAAGACATTCTTCTAAAGGAAGAACTGGATAGCCTTGCAACTAGGTTTCCCTCCCGCTTCACCATCTACTATGTTCTCAATCAGCCTCCTGAAGGATGGGATGGTGGCATTGGCTTTGTAACTGAGGAAATGATACGACAACGTTGTCCTGCACCATCCCCTAATGTTCGGGTGGATCTTGAGGTGCGGACCACCCCCATGAACAAAGTTATGGCTGCTTACCTCAACAGCATTGGCTACACTTCCCAAATGCAGTTCCAGTTCTAA | 852 | 46.95 | MATSLAHYHRPEFLTIAVAVVAIGVGTAYYFYITKKSKAKGCLDPDNFKEFKLVKRTQLSHNVAKFRFSLPTPTSVLGLPIGQHMSCRGKDSKGEDVVKPYTPTTLDTDVGYFDLVIKMYPQGRMSHHFREMREGDYLAVKGPKGRFKYEANEVEAFGMLAGGTGITPMFQVTRAILENPVDRTNVHLIYANVTYEDILLKEELDSLATRFPSRFTIYYVLNQPPEGWDGGIGFVTEEMIRQRCPAPSPNVRVDLEVRTTPMNKVMAAYLNSIGYTSQMQFQF | 283 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
9 | 47301682 | 47304809 | - | Lag0010442.1 | Lac9g2955 | 621881 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lac9g2955 | 283 | Pfam | Oxidoreductase FAD-binding domain | 51 | 149 | IPR008333 | - | |
Lac9g2955 | 283 | SUPERFAMILY | Riboflavin synthase domain-like | 42 | 150 | IPR017938 | - | |
Lac9g2955 | 283 | FunFam | NADH-cytochrome b5 reductase | 41 | 140 | - | - | |
Lac9g2955 | 283 | PRINTS | Flavoprotein pyridine nucleotide cytochrome reductase signature | 196 | 207 | IPR001709 | GO:0016491(InterPro) | |
Lac9g2955 | 283 | PRINTS | Flavoprotein pyridine nucleotide cytochrome reductase signature | 158 | 177 | IPR001709 | GO:0016491(InterPro) | |
Lac9g2955 | 283 | Gene3D | - | 140 | 283 | IPR039261 | - | |
Lac9g2955 | 283 | PRINTS | Cytochrome B5 reductase signature | 99 | 106 | - | - | |
Lac9g2955 | 283 | PRINTS | Cytochrome B5 reductase signature | 158 | 177 | - | - | |
Lac9g2955 | 283 | PRINTS | Cytochrome B5 reductase signature | 77 | 88 | - | - | |
Lac9g2955 | 283 | PRINTS | Cytochrome B5 reductase signature | 135 | 149 | - | - | |
Lac9g2955 | 283 | PRINTS | Cytochrome B5 reductase signature | 196 | 207 | - | - | |
Lac9g2955 | 283 | SUPERFAMILY | Ferredoxin reductase-like, C-terminal NADP-linked domain | 138 | 253 | IPR039261 | - | |
Lac9g2955 | 283 | Gene3D | Translation factors | 41 | 139 | - | - | |
Lac9g2955 | 283 | Pfam | Oxidoreductase NAD-binding domain | 159 | 247 | IPR001433 | GO:0016491(InterPro) | |
Lac9g2955 | 283 | PANTHER | NADH-CYTOCHROME B5 REDUCTASE | 18 | 283 | IPR001834 | GO:0004128(PANTHER)|GO:0016491(InterPro)|GO:0022900(PANTHER) | |
Lac9g2955 | 283 | CDD | cyt_b5_reduct_like | 51 | 283 | - | - | |
Lac9g2955 | 283 | FunFam | NADH-cytochrome b5 reductase | 140 | 283 | - | - | |
Lac9g2955 | 283 | ProSiteProfiles | Ferredoxin reductase-type FAD binding domain profile. | 46 | 150 | IPR017927 | GO:0016491(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lac10g2390 | Lac-Chr10:36703378 | Lac9g2955 | Lac-Chr9:47301682 | 6.80E-91 | dispersed | |
Lac6g2950 | Lac-Chr6:47099304 | Lac9g2955 | Lac-Chr9:47301682 | 6.00E-47 | dispersed | |
Lac9g2955 | Lac-Chr9:47301682 | Lac1g1605 | Lac-Chr1:37275908 | 9.60E-110 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lac9g2955 | K00326 | - | csv:101219272 | 493.426 |