Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lac9g2973 ATGAAGCAATGGGGAGGTCTAAATTCAGAATCTCTTGCAACCTTATGGGTATTGTGCACGTCTCTAGCTCTAGCTCCAATTGTTGGATCAGTCTCATCTCCAAAGCACCAATTTCGTGGAATTTCTCCCCAAGATGAGATGTATTACAAGTTGGACACGATCAAATGTAGAGACGGTTCCAACAAATTTTCCAAGGCTCAGCTTAACGATAACTACTGCGATTGTCCTGATGGCACTGACGAACCTGGCACATCCGCATGCCCAAGTGGAAAGTTCTATTGTCGAAATGCAGGGCACGTTCCACTTTTGTTGTTTTCTTCAAGGGTGAACGACGGTATATGTGATTGTTGTGATGGAAGTGACGAATATGACAGCAAAGTCAAATGCCCAAATACGTGCTGGGAAGCTGGGAAAGTGGCAAGAGATAAATTGAAGAAAAAGATTGCAACCTTTGAAGAAGGTGTTAAAATTCGAAAACAAGAAGTTGAGCATGCAAAAGTCGCAATAACCAAGGATCAGGCAGAGCTATTGAAGTTGAAAAACGAGGAAAAAGTATTAAAAGGGCTCTTGGAACAACTTAAAGAGCGCAAAGAACAAATAGAGAAGGTAGAAGAGCAGGAGCGATTATGGAAAGAAAAAGAAGAGAAGAAACGTTTGGAGAGAGAAAAAGATGAGACAAAAAAAATAGAGTCCACAGAAACAACTAATGTCGGGGAAAGCAAAACTCAAGCGGAAGACAATTGGGAAAAAGATGAAGCTATAAGAAATGATGGCGAGGACTATAAACAAGGAGAAGGCAGTGCTGATGATAAAATTGGGAACTGGGAGGCATCTGCCACAGATCAGGCCCCATCCCTAAGATAA 864 41.78 MKQWGGLNSESLATLWVLCTSLALAPIVGSVSSPKHQFRGISPQDEMYYKLDTIKCRDGSNKFSKAQLNDNYCDCPDGTDEPGTSACPSGKFYCRNAGHVPLLLFSSRVNDGICDCCDGSDEYDSKVKCPNTCWEAGKVARDKLKKKIATFEEGVKIRKQEVEHAKVAITKDQAELLKLKNEEKVLKGLLEQLKERKEQIEKVEEQERLWKEKEEKKRLEREKDETKKIESTETTNVGESKTQAEDNWEKDEAIRNDGEDYKQGEGSADDKIGNWEASATDQAPSLR 287
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
9 47423422 47428611 + Lag0010460.1 Lac9g2973 621899
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lac9g2973 287 PANTHER N-LINKED OLIGOSACCHARIDE PROCESSING 21 237 IPR039794 GO:0006491(PANTHER)|GO:0017177(PANTHER)
Lac9g2973 287 MobiDBLite consensus disorder prediction 215 287 - -
Lac9g2973 287 Gene3D - 84 135 IPR036055 GO:0005515(InterPro)
Lac9g2973 287 Coils Coil 176 232 - -
Lac9g2973 287 MobiDBLite consensus disorder prediction 243 269 - -
Lac9g2973 287 Pfam Glucosidase II beta subunit-like 31 174 IPR028146 -
Lac9g2973 287 SUPERFAMILY LDL receptor-like module 85 124 IPR036055 GO:0005515(InterPro)
Lac9g2973 287 MobiDBLite consensus disorder prediction 215 234 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lac12g0541 Lac-Chr12:5830383 Lac9g2973 Lac-Chr9:47423422 2.30E-26 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lac9g2973 K08288 - csv:101221877 450.669