Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy10g0065 ATGAATGACGCAGATGTTTCCAAGCAGATCCAGCAGATGGTGAGGTTCATCCGCCAGGAAGCGGAGGAAAAGGCCAACGAGATCTCCGTCTCCGCTGAAGAAGAATTCAATATTGAAAAGCTGCAGCTGGTTGAGGCAGAGAAGAAGAAGATCAGGCAAGAGTACGAGAAGAAGGAGAAGCAAGTTGAAATTCGGAAGAAGATTGAGTACTCCATGCAGCTCAATGCTTCTCGGATCAAAGTTCTGCAAGCACAGGATGATGTAGTGAACTCTATGAAAGAGGCAGCTTCAAAGGAACTTCTGAATGTAAGCCAAAATGAACATGTCTACAAGAATCTTTTGAAGGATCTCATTGTTCAGAGTTTGCTTCGACTGAAAGAGCCAGCTGTTTTATTGCGATGCCGCAAAGGTGACGTCCATTTGGTGGAGTCTGTGCTGGGTTCAGCAGCAGTTGAATATGCAGAGAAAGCAAAAGTTCATGAGCCAGAGATCATTATTGACCATGTCCATCTTCCACCTGGTCCAAGCCATCACCATCATCACGAGGCTTTTTGCTCTGGAGGTGTAGTATTGGCATCTCGAGATGGGAAGATCGTCTGTGAGAACACCCTTGATGCTAGGTTGGATGTTGTGTTCCGTAAAAAACTTCCAGAGGTACTTTCTCTTCTCAACTATACCCTACTGTCTATTGCTGGATCCGAAAAAGCCTTTTCAGTCAAGTTGCTGCATGATGGACTGCTTTCGACTCGATCATGGCGCTTCCTGTGA 768 45.7 MNDADVSKQIQQMVRFIRQEAEEKANEISVSAEEEFNIEKLQLVEAEKKKIRQEYEKKEKQVEIRKKIEYSMQLNASRIKVLQAQDDVVNSMKEAASKELLNVSQNEHVYKNLLKDLIVQSLLRLKEPAVLLRCRKGDVHLVESVLGSAAVEYAEKAKVHEPEIIIDHVHLPPGPSHHHHHEAFCSGGVVLASRDGKIVCENTLDARLDVVFRKKLPEVLSLLNYTLLSIAGSEKAFSVKLLHDGLLSTRSWRFL 255
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 914506 919096 + Maker00001952 Lcy10g0065 643576
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy10g0065 255 Pfam ATP synthase (E/31 kDa) subunit 16 223 IPR002842 GO:0033178(InterPro)|GO:0046961(InterPro)|GO:1902600(InterPro)
Lcy10g0065 255 Gene3D - 92 226 IPR038495 -
Lcy10g0065 255 Gene3D - 1 62 - -
Lcy10g0065 255 SUPERFAMILY V-type ATPase subunit E-like 87 223 - -
Lcy10g0065 255 Hamap V-type proton ATPase subunit E [atpE]. 8 225 IPR002842 GO:0033178(InterPro)|GO:0046961(InterPro)|GO:1902600(InterPro)
Lcy10g0065 255 PANTHER ATPASE H+-TRANSPORTING V1 SUBUNIT E1A-RELATED 1 223 IPR002842 GO:0033178(InterPro)|GO:0046961(PANTHER)|GO:0046961(InterPro)|GO:1902600(InterPro)
Lcy10g0065 255 Coils Coil 38 61 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy10g0065 Lcy-Chr10:914506 Lcy8g0811 Lcy-Chr8:29341188 2.94E-10 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy10g0065 K02150 - csv:101217221 396.741