Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy10g0127 GCGAAGCTTTTGGAACTGAATGAAGATGTGATCTTTCAGAATGATTTACTGATGGAGGTGGAAAAGAGAAGGATGGAAATGGAAAGCGGAAGCGAACTCTGGCAGAAAGTGGCCCTCACAGCTTCGGAGGTTTTCTCGAGCTTGTTCCGCGACCGCGAGTCGCTTGCGTTCAATTCCGCCTGTGGAGGTTCCATAGCATCAACGATGGGAAGGCGATCCATATGGGTTGCTCTTCTCGTCCTCTCTCTTCTTCTTTCGTTGCAATCGCAGAGAGGTTCTTCCACTCTTCCTCTTCAATCATTGAATCAGGGTTTTAAAGATTCTGCCACTGAAAGTACTCCGAAGCAGGATTGGAACAGTGCTCACGAGGTACATTGCTCGAGAGAAAGGAGTAGAGCAGCATGGAAAATAATTGAGGAGTATCTAATGCCCTTTGTGGATAAAAAGAAATACAAGATTTCGACTGCGTGTAGGCTTCACCCTGATAATGACATGTTCAGAGATCAAGAACAGCACAAGAGCCATCTAGATTTTAATGACTGGAAGTGTGGATATTGTAGAAAAAGATTCTATGAAGAGAAGTATCTCGATCAGCACTTTGACAATAGACACTATACTTTACTCAATGTGAGTCGAAGCAAGTGCATGGCAGATCTTTGTGGTGCATTGCACTGTGATCATGTGATAGATACAATATCACAGAAAAGTAAATGCAATCCTGCTGCTGCGGCAAGAAATAAACACATGTGTGAGGCTCTTGCTGACAGTTGTTTTCCTGTTAATGAGGGTGCTTTGGCCAGCCATCTTCACGAATTCTTCTTGCGTCAGTTTTGTGATGCACACACTTGTAGCGGAAAGCCCAAACCTTTCTCCAGAGGTCGACAGGTTAGGACGAGTGGATTCTACATTGTTATTTCAGTTTTGACAGTCCTTTTCGTGCTGTTTTTCTATGTCTTCATTTACTTGTATAAAAGGTATCTTTCCTTTGGCCTACCTTCATTTGTATCAGTTCATAAGAGTTTCAACTTTAACTTGACAATCGTGTTCGTCTTAAAGGGGAATGAGAACGAGACCGCAAGTGTTGAAGCGCCTCTCCGAAAGTGGAAGAAAGAAAAAACCTTCATAAATAGAGCCTGTTGCCCTTTCAATGATAATATGTAG 1161 42.89 AKLLELNEDVIFQNDLLMEVEKRRMEMESGSELWQKVALTASEVFSSLFRDRESLAFNSACGGSIASTMGRRSIWVALLVLSLLLSLQSQRGSSTLPLQSLNQGFKDSATESTPKQDWNSAHEVHCSRERSRAAWKIIEEYLMPFVDKKKYKISTACRLHPDNDMFRDQEQHKSHLDFNDWKCGYCRKRFYEEKYLDQHFDNRHYTLLNVSRSKCMADLCGALHCDHVIDTISQKSKCNPAAAARNKHMCEALADSCFPVNEGALASHLHEFFLRQFCDAHTCSGKPKPFSRGRQVRTSGFYIVISVLTVLFVLFFYVFIYLYKRYLSFGLPSFVSVHKSFNFNLTIVFVLKGNENETASVEAPLRKWKKEKTFINRACCPFNDNM 386
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 1657620 1661652 - Maker00001788 Lcy10g0127 643638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy10g0127 386 PANTHER ZINC FINGER PROTEIN-RELATED 73 325 - -
Lcy10g0127 386 ProSitePatterns Zinc finger C2H2 type domain signature. 183 204 IPR013087 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy10g0127 Lcy-Chr10:1657620 Lcy2g0092 Lcy-Chr2:736701 6.16E-82 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy10g0127 - - - 0.0