Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lcy10g0192 | ATGGCTTCCATTTTCATCCATTTCTCTAACCAAATTCCAATCCACGGAGTTCCCTTCTTCTTCTTCTTCTTCCTCTTCTTCTCCGTTTCTCTCTCAGATCCCCGAATCTCAGAATCCGGAATCTTCTGCGGAACCTCCAAGCCTCCGCCCAACTCCAGATTCATCCCGACCTTCATCGAAGAAATGGAAGCCATATCCGAGCTTCTCATAACTCGCAGTTGGACCACCCACTTCGTCAATTCCACTCCCCCAATGTTCGCCCTATCGCAATGCTTCAACGATCTCTCTCACACCGATTGCCTTCTCTGCTACGCCGCCAGCCGCACCTCCTTGCCGCGGTGCCTCCCCGCCGTCGCCGCCCGGATCTTCCTCGACGGATGCTTCCTCCGCTACGACAATTACAGCTTCTACAAAGAATCCACCGATTCGGTTAGGGATTCTGTGAATTGCACCTCGGAATTGGGGGAAATCGGTGAATCGGAGAGGTTAGGGTTTGAGAAGAATGTTAGGGTTGTTGTTGAAGCTGTGACGAGGACGGCCATGGCGAAGGGCGGATTTGGGATTGGGGAAGTGAATGGGTTGTTTGGTTTGGCGCAGTGTTGGGGGAGTGTGGAGCCTGAGGGGTGCAGGGCTTGCTTGGAGAAGGCGAAGAGGAGTATTAGGAGCTGCTCGCCGAGTAGAGAAGGGAGGGCTTTGAATGCTGGGTGTTATTTGAGGTATTCGACTGTGAAGTTCTATAATGATAAGGAAGAAGAACGGGATCATGATGGATTTTCGGGAAGAAGAGCTGCAGTTGCCATTGCCTTAGCTTCAGCTGCCGCCTTGATCATTTCCTGTTCTGCTGCTTTTGCATGCTATGCAAGAATATCAAAGTTCAAAAAAGAGAAGAAAAAACAGTCCCTTATACCAATTTCCTTTAAGGATTCCGATTTGAATTTCAAGTATGAAACGCTTGAAAAGGCAACTAATTACTTCAACCCATCAAGTAAGATAGGCCAAGGTGGTGCTGGTTCTGTATATAAAGGGACTCTTCCAAGTGGGCAGATTGTTGCTGTGAAGAGATTGGTTTTCCATACTAGGCAATGGGTTGATGAGTTCTTCAATGAGGTGAATTTGATCCGGGGAATCCAACACAAGAACCTTGTTGCCCTTTTAGGTTGCAGCATTGAAGGACCTGAAAGTCTGCTGGTCTACGAGTATGTTCCGAACCGGAGCCTCGATCACTTCATTTTCGATAAGAACAACGTTCAGATTCTAAATTGGAAGCAGCGTTTCAACATTATTGTGGGAACAGCTGAGGGGCTTGCACATCTTCACGAAGGTTGTAAAATAAGAATAGTCCATAGAGACATAAAGAGTAGCAATGTTCTACTGGATGAGAATTTCAATCCAAAGATTGCAGATTTTGGCCTCGCTCGGCATTTTGCTACTGATCAGACTCATCTTAGCACGGGAATTGCCGGGACACTAGGTTACATGGCACCTGAATATCTCGTTCGAGGACAACTTACAGAAAAAGCAGATGTTTATAGCTTTGGAGTGTTGATACTCGAAATCGTTTGCGGTAGAAGAAACAGTTCCTTCACAGAGAACTCTACCCCACTCCTCCAAACAGTTTGGGATCTGTACAAATCAGAGAGATTAACTGAAGCCATTGACACATGCCTGAACAAGGATTACCCTGCAAAAGAAGCCATGGATGTTCTGCAAATAGGCCTTTTATGCACACAAGCTCTAGCTTCTCTGAGACCGTCAATGGCGACAATAGTGAAACTGCTAACGAGTGAAGGAGAAAGGAAGGTTGCAATCCCAGAACAGCCTCCATTTCTGAATCCCTGTGGACCCTCAAGAAGGTCTTGCAGAATTAGTAGCTTGGTATCTCATGCAGTTTCCAAACTTGAAGTTTCTTCTTGCACATCAACAGATTCAGGTTCTTCTTCTAATTTACCTTCAAGAAGTGGAGATTTTGCTGAATTAAATTCAAATTGA | 1989 | 46.05 | MASIFIHFSNQIPIHGVPFFFFFFLFFSVSLSDPRISESGIFCGTSKPPPNSRFIPTFIEEMEAISELLITRSWTTHFVNSTPPMFALSQCFNDLSHTDCLLCYAASRTSLPRCLPAVAARIFLDGCFLRYDNYSFYKESTDSVRDSVNCTSELGEIGESERLGFEKNVRVVVEAVTRTAMAKGGFGIGEVNGLFGLAQCWGSVEPEGCRACLEKAKRSIRSCSPSREGRALNAGCYLRYSTVKFYNDKEEERDHDGFSGRRAAVAIALASAAALIISCSAAFACYARISKFKKEKKKQSLIPISFKDSDLNFKYETLEKATNYFNPSSKIGQGGAGSVYKGTLPSGQIVAVKRLVFHTRQWVDEFFNEVNLIRGIQHKNLVALLGCSIEGPESLLVYEYVPNRSLDHFIFDKNNVQILNWKQRFNIIVGTAEGLAHLHEGCKIRIVHRDIKSSNVLLDENFNPKIADFGLARHFATDQTHLSTGIAGTLGYMAPEYLVRGQLTEKADVYSFGVLILEIVCGRRNSSFTENSTPLLQTVWDLYKSERLTEAIDTCLNKDYPAKEAMDVLQIGLLCTQALASLRPSMATIVKLLTSEGERKVAIPEQPPFLNPCGPSRRSCRISSLVSHAVSKLEVSSCTSTDSGSSSNLPSRSGDFAELNSN | 662 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 2743993 | 2747412 | - | Maker00001716 | Lcy10g0192 | 643703 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lcy10g0192 | 662 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 446 | 458 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Lcy10g0192 | 662 | ProSiteProfiles | Protein kinase domain profile. | 325 | 586 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Lcy10g0192 | 662 | FunFam | Cysteine-rich receptor-like protein kinase 2 | 401 | 601 | - | - | |
Lcy10g0192 | 662 | FunFam | Cysteine-rich receptor-like protein kinase 42 | 62 | 136 | - | - | |
Lcy10g0192 | 662 | PANTHER | CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 | 180 | 623 | IPR052059 | GO:0004674(PANTHER)|GO:0006468(PANTHER) | |
Lcy10g0192 | 662 | MobiDBLite | consensus disorder prediction | 637 | 662 | - | - | |
Lcy10g0192 | 662 | FunFam | Cysteine-rich receptor-like protein kinase 2 | 292 | 400 | - | - | |
Lcy10g0192 | 662 | SUPERFAMILY | Protein kinase-like (PK-like) | 301 | 593 | IPR011009 | - | |
Lcy10g0192 | 662 | CDD | STKc_IRAK | 331 | 594 | - | - | |
Lcy10g0192 | 662 | ProSiteProfiles | Gnk2-homologous domain profile. | 145 | 245 | IPR002902 | - | |
Lcy10g0192 | 662 | FunFam | Cysteine-rich receptor-like protein kinase 3 | 147 | 245 | - | - | |
Lcy10g0192 | 662 | SMART | serkin_6 | 325 | 574 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Lcy10g0192 | 662 | Gene3D | Phosphorylase Kinase; domain 1 | 285 | 400 | - | - | |
Lcy10g0192 | 662 | ProSiteProfiles | Gnk2-homologous domain profile. | 36 | 136 | IPR002902 | - | |
Lcy10g0192 | 662 | Pfam | Protein kinase domain | 327 | 570 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Lcy10g0192 | 662 | Pfam | Salt stress response/antifungal | 75 | 134 | IPR002902 | - | |
Lcy10g0192 | 662 | Pfam | Salt stress response/antifungal | 160 | 242 | IPR002902 | - | |
Lcy10g0192 | 662 | Gene3D | Transferase(Phosphotransferase) domain 1 | 401 | 604 | - | - | |
Lcy10g0192 | 662 | Gene3D | - | 159 | 245 | IPR038408 | - | |
Lcy10g0192 | 662 | Gene3D | - | 42 | 136 | IPR038408 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lcy10g0192 | Lcy-Chr10:2743993 | Lcy13g1270 | Lcy-Chr13:29861599 | 2.00E-146 | dispersed | |
Lcy7g1082 | Lcy-Chr7:11576919 | Lcy10g0192 | Lcy-Chr10:2743993 | 8.32E-52 | dispersed | |
Lcy10g0192 | Lcy-Chr10:2743993 | Lcy3g0138 | Lcy-Chr3:3500292 | 3.24E-52 | wgd | |
Lcy10g0192 | Lcy-Chr10:2743993 | Lcy3g0415 | Lcy-Chr3:13866247 | 5.54E-56 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
65367 | None | None | None | None | Lcy | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lcy10g0192 | - | - | - | 0.0 |