Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy10g0192 ATGGCTTCCATTTTCATCCATTTCTCTAACCAAATTCCAATCCACGGAGTTCCCTTCTTCTTCTTCTTCTTCCTCTTCTTCTCCGTTTCTCTCTCAGATCCCCGAATCTCAGAATCCGGAATCTTCTGCGGAACCTCCAAGCCTCCGCCCAACTCCAGATTCATCCCGACCTTCATCGAAGAAATGGAAGCCATATCCGAGCTTCTCATAACTCGCAGTTGGACCACCCACTTCGTCAATTCCACTCCCCCAATGTTCGCCCTATCGCAATGCTTCAACGATCTCTCTCACACCGATTGCCTTCTCTGCTACGCCGCCAGCCGCACCTCCTTGCCGCGGTGCCTCCCCGCCGTCGCCGCCCGGATCTTCCTCGACGGATGCTTCCTCCGCTACGACAATTACAGCTTCTACAAAGAATCCACCGATTCGGTTAGGGATTCTGTGAATTGCACCTCGGAATTGGGGGAAATCGGTGAATCGGAGAGGTTAGGGTTTGAGAAGAATGTTAGGGTTGTTGTTGAAGCTGTGACGAGGACGGCCATGGCGAAGGGCGGATTTGGGATTGGGGAAGTGAATGGGTTGTTTGGTTTGGCGCAGTGTTGGGGGAGTGTGGAGCCTGAGGGGTGCAGGGCTTGCTTGGAGAAGGCGAAGAGGAGTATTAGGAGCTGCTCGCCGAGTAGAGAAGGGAGGGCTTTGAATGCTGGGTGTTATTTGAGGTATTCGACTGTGAAGTTCTATAATGATAAGGAAGAAGAACGGGATCATGATGGATTTTCGGGAAGAAGAGCTGCAGTTGCCATTGCCTTAGCTTCAGCTGCCGCCTTGATCATTTCCTGTTCTGCTGCTTTTGCATGCTATGCAAGAATATCAAAGTTCAAAAAAGAGAAGAAAAAACAGTCCCTTATACCAATTTCCTTTAAGGATTCCGATTTGAATTTCAAGTATGAAACGCTTGAAAAGGCAACTAATTACTTCAACCCATCAAGTAAGATAGGCCAAGGTGGTGCTGGTTCTGTATATAAAGGGACTCTTCCAAGTGGGCAGATTGTTGCTGTGAAGAGATTGGTTTTCCATACTAGGCAATGGGTTGATGAGTTCTTCAATGAGGTGAATTTGATCCGGGGAATCCAACACAAGAACCTTGTTGCCCTTTTAGGTTGCAGCATTGAAGGACCTGAAAGTCTGCTGGTCTACGAGTATGTTCCGAACCGGAGCCTCGATCACTTCATTTTCGATAAGAACAACGTTCAGATTCTAAATTGGAAGCAGCGTTTCAACATTATTGTGGGAACAGCTGAGGGGCTTGCACATCTTCACGAAGGTTGTAAAATAAGAATAGTCCATAGAGACATAAAGAGTAGCAATGTTCTACTGGATGAGAATTTCAATCCAAAGATTGCAGATTTTGGCCTCGCTCGGCATTTTGCTACTGATCAGACTCATCTTAGCACGGGAATTGCCGGGACACTAGGTTACATGGCACCTGAATATCTCGTTCGAGGACAACTTACAGAAAAAGCAGATGTTTATAGCTTTGGAGTGTTGATACTCGAAATCGTTTGCGGTAGAAGAAACAGTTCCTTCACAGAGAACTCTACCCCACTCCTCCAAACAGTTTGGGATCTGTACAAATCAGAGAGATTAACTGAAGCCATTGACACATGCCTGAACAAGGATTACCCTGCAAAAGAAGCCATGGATGTTCTGCAAATAGGCCTTTTATGCACACAAGCTCTAGCTTCTCTGAGACCGTCAATGGCGACAATAGTGAAACTGCTAACGAGTGAAGGAGAAAGGAAGGTTGCAATCCCAGAACAGCCTCCATTTCTGAATCCCTGTGGACCCTCAAGAAGGTCTTGCAGAATTAGTAGCTTGGTATCTCATGCAGTTTCCAAACTTGAAGTTTCTTCTTGCACATCAACAGATTCAGGTTCTTCTTCTAATTTACCTTCAAGAAGTGGAGATTTTGCTGAATTAAATTCAAATTGA 1989 46.05 MASIFIHFSNQIPIHGVPFFFFFFLFFSVSLSDPRISESGIFCGTSKPPPNSRFIPTFIEEMEAISELLITRSWTTHFVNSTPPMFALSQCFNDLSHTDCLLCYAASRTSLPRCLPAVAARIFLDGCFLRYDNYSFYKESTDSVRDSVNCTSELGEIGESERLGFEKNVRVVVEAVTRTAMAKGGFGIGEVNGLFGLAQCWGSVEPEGCRACLEKAKRSIRSCSPSREGRALNAGCYLRYSTVKFYNDKEEERDHDGFSGRRAAVAIALASAAALIISCSAAFACYARISKFKKEKKKQSLIPISFKDSDLNFKYETLEKATNYFNPSSKIGQGGAGSVYKGTLPSGQIVAVKRLVFHTRQWVDEFFNEVNLIRGIQHKNLVALLGCSIEGPESLLVYEYVPNRSLDHFIFDKNNVQILNWKQRFNIIVGTAEGLAHLHEGCKIRIVHRDIKSSNVLLDENFNPKIADFGLARHFATDQTHLSTGIAGTLGYMAPEYLVRGQLTEKADVYSFGVLILEIVCGRRNSSFTENSTPLLQTVWDLYKSERLTEAIDTCLNKDYPAKEAMDVLQIGLLCTQALASLRPSMATIVKLLTSEGERKVAIPEQPPFLNPCGPSRRSCRISSLVSHAVSKLEVSSCTSTDSGSSSNLPSRSGDFAELNSN 662
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
10 2743993 2747412 - Maker00001716 Lcy10g0192 643703
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lcy10g0192 662 ProSitePatterns Serine/Threonine protein kinases active-site signature. 446 458 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Lcy10g0192 662 ProSiteProfiles Protein kinase domain profile. 325 586 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lcy10g0192 662 FunFam Cysteine-rich receptor-like protein kinase 2 401 601 - -
Lcy10g0192 662 FunFam Cysteine-rich receptor-like protein kinase 42 62 136 - -
Lcy10g0192 662 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 180 623 IPR052059 GO:0004674(PANTHER)|GO:0006468(PANTHER)
Lcy10g0192 662 MobiDBLite consensus disorder prediction 637 662 - -
Lcy10g0192 662 FunFam Cysteine-rich receptor-like protein kinase 2 292 400 - -
Lcy10g0192 662 SUPERFAMILY Protein kinase-like (PK-like) 301 593 IPR011009 -
Lcy10g0192 662 CDD STKc_IRAK 331 594 - -
Lcy10g0192 662 ProSiteProfiles Gnk2-homologous domain profile. 145 245 IPR002902 -
Lcy10g0192 662 FunFam Cysteine-rich receptor-like protein kinase 3 147 245 - -
Lcy10g0192 662 SMART serkin_6 325 574 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lcy10g0192 662 Gene3D Phosphorylase Kinase; domain 1 285 400 - -
Lcy10g0192 662 ProSiteProfiles Gnk2-homologous domain profile. 36 136 IPR002902 -
Lcy10g0192 662 Pfam Protein kinase domain 327 570 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lcy10g0192 662 Pfam Salt stress response/antifungal 75 134 IPR002902 -
Lcy10g0192 662 Pfam Salt stress response/antifungal 160 242 IPR002902 -
Lcy10g0192 662 Gene3D Transferase(Phosphotransferase) domain 1 401 604 - -
Lcy10g0192 662 Gene3D - 159 245 IPR038408 -
Lcy10g0192 662 Gene3D - 42 136 IPR038408 -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy10g0192 Lcy-Chr10:2743993 Lcy13g1270 Lcy-Chr13:29861599 2.00E-146 dispersed
Lcy7g1082 Lcy-Chr7:11576919 Lcy10g0192 Lcy-Chr10:2743993 8.32E-52 dispersed
Lcy10g0192 Lcy-Chr10:2743993 Lcy3g0138 Lcy-Chr3:3500292 3.24E-52 wgd
Lcy10g0192 Lcy-Chr10:2743993 Lcy3g0415 Lcy-Chr3:13866247 5.54E-56 wgd
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
65367 None None None None Lcy PK
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy10g0192 - - - 0.0