Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy10g0268 ATGAACACCCTTGAAACTCAACAGTGCGAAGATTGCTTTGATGGGAGCTTGGGGGTTGTTTATGGCGATTTGAGCACTTCCCCTTTGTATGTTTACAAAAGCACTTTTGCTGAGGATATTCAGCACTCTGAAACCAACGAGGAGATTTATGGAGTTCTTTCTTTTGTCTTTTGGACTCTCACGCTCATTCCTTTGATTAAGTACGTCTTTATTGTGCTTCGAGCTGATGATAATGGCGAAGGGGGAACTTTCGCTCTGTACTCATTGCTCTGCCGCCATGCCCGAGTTAGCTCCTTGCCCAATTGCCAACTCGCAGATGAGGACCTTTCGGAATATACAAAAGATGGGGTTGAATTAACCAGCAAGAACACTTGTGGGTCGAGATTAAAAGCGACCTTAGAAAAGCATAGAGTGTTGCAGAGGGTCTTGCTTGTTCTAGCTCTGATTGGGGCTTGCATGGTGATTGGAGATGGAGTTCTTACACCTGCAATTTCTGGTGCTGTAGATTCTTCATGTTGTTCTGTTCTTTTTTTCAAATTGATTGTGATTTTAGAGTTTGGATTGATGAAACTTGCTTGTTTTGGGTCTTTCATGGCAGTTTTCTCTGCTGTTTCTGGGCTGGAGCTTTCCATGGCTAAAGAACACCACCGCTATGTCGAAGTCCCAGTTGCTTGTGTCATATTGGTATTCCTGTTTGCACTTCAACATTACGGAACCCATCGAGTCGGGTTTCTGTTTGCACCAGTTGTAATTACGTGGCTCCTGTGTATCAGTGCCATAGGGTTGTACAATATCTTCTACTGGAATCCCCATGTTTACCAAGCACTCTCCCCATATTATATGTACAAATTTCTGAAGAAAACCCAAAGGGGAGGTTGGATGTCCCTTGGCGGGATCCTGTTATGTATGACAGGTTCGGAAGCAATGTTTGCTGATCTCGGGCACTTCTCGCAGCTATCTATCAAGATCGCTTTCTCTTTTGTGGTTTATCCATCTTTGGTCCTGGCATACATGGGACAAGCTGCTTATCTTTCTCAACATCACGGCATGGAAAGTAACTATCGAATCGGATTTTATGTGTCTGTTCCTGGTTTAGCAGTGATAACCGTTATGCTTGTGACTACCTGTCTAATGTCTGTAGTCATCATCTTGTGCTGGCACAAAAGCTTTCTCTTTGCCATTGCCTTCATACTCATTTTTGGCTCCATTGAGTCACTCTACTTCTCAGCATCACTCATCAAGTTTCGAGAAGGGGCATGGGTCCCTATCGCACTCTCGCTCATCTTCCTAATAGTCATGTATGTATGGCATTACGGAACGCGCAAGAAATACGAGTTTGACGTTCAAAACAAAGTCTCAATCAACTGGCTCCTAGGCCTAGGACCCAGCTTAGGCATCGTGCGAGTACGCGGGATTGGTCTCATATACACCGAGCTTGTCTCAGGAATCCCCGCCATCTTCTCCCACTTCGTAACAAACCTCCCTGCCTTCCACCAAGTCCTAGTCTTCCTCTGCATCAAATCCGTCCCCGTCCCACACGTGAGGCCTGGAGAGAGATTCCTAGTAGGAAGAGTAGGGCCAAAAGAGTACCGTCTCTACCGATGCATAGCGAGATACGGGTACCGCGACATCCACAAGGACGACATGGAGTTCGAGAAGGACCTGGTGTGCAGCATCGCGGAGTTCATCCGGTCGGAGAAGGCGGAAAGCAGCGTGAAGGTAGAAGATGCAGAGGAGAGTGAGAGAATGACAGTGGTGGGGACATGTTCAACACATGTAGATGGAGTGAGAATGTGTGAAGATGAAGGTGGGGAAAGAGGAGCAGCAGCAGCAGCAGAAACATCAGAGGTGAGGGAGATAAAATCACCACAAAAAGTGAGGAAAAGAGTGAGGTTTCTTGTACCAGAGAGCCCAAAAATGGATGTGGAGACAAGGAGGGAACTGCAAGAGCTAATGGAGGCAAGAGAGGCAGGAATGGCTTTCATAATGGGACATTCATATGTCAAAGCAAAGAGGGGATCAGGTTGGGTGAAGAAAGTGGTCATAAATTATGGGTATGATTTTTTGAGAAGGAACTCAAGAGGCCCAAGCTATGCTTGGACTGTGCCTCATGCATCTACTTTAGAGGTGGGGATGATCTACCAAGTTTGA 2151 46.21 MNTLETQQCEDCFDGSLGVVYGDLSTSPLYVYKSTFAEDIQHSETNEEIYGVLSFVFWTLTLIPLIKYVFIVLRADDNGEGGTFALYSLLCRHARVSSLPNCQLADEDLSEYTKDGVELTSKNTCGSRLKATLEKHRVLQRVLLVLALIGACMVIGDGVLTPAISGAVDSSCCSVLFFKLIVILEFGLMKLACFGSFMAVFSAVSGLELSMAKEHHRYVEVPVACVILVFLFALQHYGTHRVGFLFAPVVITWLLCISAIGLYNIFYWNPHVYQALSPYYMYKFLKKTQRGGWMSLGGILLCMTGSEAMFADLGHFSQLSIKIAFSFVVYPSLVLAYMGQAAYLSQHHGMESNYRIGFYVSVPGLAVITVMLVTTCLMSVVIILCWHKSFLFAIAFILIFGSIESLYFSASLIKFREGAWVPIALSLIFLIVMYVWHYGTRKKYEFDVQNKVSINWLLGLGPSLGIVRVRGIGLIYTELVSGIPAIFSHFVTNLPAFHQVLVFLCIKSVPVPHVRPGERFLVGRVGPKEYRLYRCIARYGYRDIHKDDMEFEKDLVCSIAEFIRSEKAESSVKVEDAEESERMTVVGTCSTHVDGVRMCEDEGGERGAAAAAETSEVREIKSPQKVRKRVRFLVPESPKMDVETRRELQELMEAREAGMAFIMGHSYVKAKRGSGWVKKVVINYGYDFLRRNSRGPSYAWTVPHASTLEVGMIYQV 716
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 4419899 4425585 + Maker00001932 Lcy10g0268 643779
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy10g0268 716 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 16 363 IPR003855 GO:0006813(PANTHER)|GO:0015079(PANTHER)|GO:0015079(InterPro)|GO:0016020(PANTHER)|GO:0016020(InterPro)|GO:0071805(InterPro)
Lcy10g0268 716 Pfam K+ potassium transporter C-terminal domain 471 715 IPR053952 -
Lcy10g0268 716 Pfam K+ potassium transporter integral membrane domain 198 361 IPR053951 -
Lcy10g0268 716 Pfam K+ potassium transporter integral membrane domain 364 457 IPR053951 -
Lcy10g0268 716 Pfam K+ potassium transporter integral membrane domain 16 165 IPR053951 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy10g0268 Lcy-Chr10:4419899 Lcy7g0195 Lcy-Chr7:1702649 1.78e-310 dispersed
Lcy5g2068 Lcy-Chr5:43789806 Lcy10g0268 Lcy-Chr10:4419899 6.62E-176 transposed
Lcy10g0268 Lcy-Chr10:4419899 Lcy10g1936 Lcy-Chr10:43445714 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy10g0268 K03549 - rcu:8280544 793.112