Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lcy10g0408 | ATGTATGGTTTCGAAGCCCTCACGTTCAACATTCATGGAGGCTATTTGGAGGCCATCGTCCGTGGACATAGGGCTGGGTTGCTGACCGCCGCTGATTATAACAATTTGTGTCAGTGCGAAACCCTAGATGATATCAAGATGCACCTCTCTGCCACTGAGTATGGCCCTTATCTCCAAAACGAACCATCTCCATTGCATACGACAACAATTGTGGAGAAATGCACCCTTAAACTGGTTGATGAGTATAAACACATGTTGTGCCAAGCCACGGAACCCCTGTCTACCTTCTTAGAGTATATCACATATGGTCACATGATAGACAATGTTGTCCTTATCGTTACTGGAACCTTGCATGAGAGAGATGTTCAGGAACTATTGGAGAAGTGCCACCCTTTGGGCATGTTCGACAGCATTGCTACCTTGGCAGTTGCTCAGAATATGCGGGAACTTTATAGATTGGTGCTTGTTGACACCCCTTTGGCTCCATACTTCTCAGAGTGTATCACATCGGAGGATTTGGATGACATGAACATAGAAATAATGAGGAACACTCTCTACAAGGCATACCTAGAGGATTTCTACAGGTTCTGTCAGAAACTGGGTGGTGCCACTGCTGAGATCATGTCTGACCTCCTTGCTTTTGAGGCTGATAGAAGGGCTGTCAATATTACCATAAATAGTATTGGCACTGAGCTTACCCGAGATGACCGAAGGAAGTTATATTCCAATTTTGGTTTACTTTACCCCTATGGTCATGAGGAACTTGCTATCTGTGAGGACATTGATCAGGTTCGTGGTGCCATGGAAAAATATCCTCCCTACCAGTCAATTTTTTCTAAGCTATCATATGGAGAAAGCCAGATGCTTGACAAGGCATTCTATGAAGAGGAGGTGAAAAGGCTATGCCTAGCATTTGAGCAACAGTTCCATTATGGTGTTTTCTTTGCATACATGAGGTTGAGAGAACAGGAGATTAGGAACCTAATGTGGATCTCGGAATGCGTTGCTCAAAACCAGAAGTCGAGGGTTCACGACAGTGTCGTCTTCATATTTTAG | 1056 | 44.32 | MYGFEALTFNIHGGYLEAIVRGHRAGLLTAADYNNLCQCETLDDIKMHLSATEYGPYLQNEPSPLHTTTIVEKCTLKLVDEYKHMLCQATEPLSTFLEYITYGHMIDNVVLIVTGTLHERDVQELLEKCHPLGMFDSIATLAVAQNMRELYRLVLVDTPLAPYFSECITSEDLDDMNIEIMRNTLYKAYLEDFYRFCQKLGGATAEIMSDLLAFEADRRAVNITINSIGTELTRDDRRKLYSNFGLLYPYGHEELAICEDIDQVRGAMEKYPPYQSIFSKLSYGESQMLDKAFYEEEVKRLCLAFEQQFHYGVFFAYMRLREQEIRNLMWISECVAQNQKSRVHDSVVFIF | 351 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 8577984 | 8582261 | - | Maker00010828 | Lcy10g0408 | 643919 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lcy10g0408 | 351 | FunFam | V-type proton ATPase subunit | 91 | 205 | - | - | |
Lcy10g0408 | 351 | FunFam | V-type proton ATPase subunit | 14 | 128 | - | - | |
Lcy10g0408 | 351 | Gene3D | - | 91 | 199 | IPR035067 | - | |
Lcy10g0408 | 351 | PANTHER | VACUOLAR ATP SYNTHASE SUBUNIT AC39 | 1 | 351 | IPR016727 | GO:0007034(PANTHER)|GO:0007035(PANTHER)|GO:0016471(PANTHER)|GO:0033179(InterPro)|GO:0046961(InterPro)|GO:1902600(InterPro) | |
Lcy10g0408 | 351 | Pfam | ATP synthase (C/AC39) subunit | 16 | 344 | IPR002843 | GO:0046961(InterPro) | |
Lcy10g0408 | 351 | SUPERFAMILY | V-type ATP synthase subunit C | 14 | 349 | IPR036079 | - | |
Lcy10g0408 | 351 | Gene3D | - | 206 | 309 | IPR035067 | - | |
Lcy10g0408 | 351 | FunFam | V-type proton ATPase subunit | 206 | 309 | - | - | |
Lcy10g0408 | 351 | PIRSF | V-ATP_synth_D | 4 | 350 | IPR016727 | GO:0033179(InterPro)|GO:0046961(InterPro)|GO:1902600(InterPro) | |
Lcy10g0408 | 351 | Gene3D | ATP synthase (C/AC39) subunit, domain 3 | 14 | 335 | IPR044911 | - |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lcy10g0408 | K02146 | - | csv:101203260 | 715.687 |