Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy10g0408 ATGTATGGTTTCGAAGCCCTCACGTTCAACATTCATGGAGGCTATTTGGAGGCCATCGTCCGTGGACATAGGGCTGGGTTGCTGACCGCCGCTGATTATAACAATTTGTGTCAGTGCGAAACCCTAGATGATATCAAGATGCACCTCTCTGCCACTGAGTATGGCCCTTATCTCCAAAACGAACCATCTCCATTGCATACGACAACAATTGTGGAGAAATGCACCCTTAAACTGGTTGATGAGTATAAACACATGTTGTGCCAAGCCACGGAACCCCTGTCTACCTTCTTAGAGTATATCACATATGGTCACATGATAGACAATGTTGTCCTTATCGTTACTGGAACCTTGCATGAGAGAGATGTTCAGGAACTATTGGAGAAGTGCCACCCTTTGGGCATGTTCGACAGCATTGCTACCTTGGCAGTTGCTCAGAATATGCGGGAACTTTATAGATTGGTGCTTGTTGACACCCCTTTGGCTCCATACTTCTCAGAGTGTATCACATCGGAGGATTTGGATGACATGAACATAGAAATAATGAGGAACACTCTCTACAAGGCATACCTAGAGGATTTCTACAGGTTCTGTCAGAAACTGGGTGGTGCCACTGCTGAGATCATGTCTGACCTCCTTGCTTTTGAGGCTGATAGAAGGGCTGTCAATATTACCATAAATAGTATTGGCACTGAGCTTACCCGAGATGACCGAAGGAAGTTATATTCCAATTTTGGTTTACTTTACCCCTATGGTCATGAGGAACTTGCTATCTGTGAGGACATTGATCAGGTTCGTGGTGCCATGGAAAAATATCCTCCCTACCAGTCAATTTTTTCTAAGCTATCATATGGAGAAAGCCAGATGCTTGACAAGGCATTCTATGAAGAGGAGGTGAAAAGGCTATGCCTAGCATTTGAGCAACAGTTCCATTATGGTGTTTTCTTTGCATACATGAGGTTGAGAGAACAGGAGATTAGGAACCTAATGTGGATCTCGGAATGCGTTGCTCAAAACCAGAAGTCGAGGGTTCACGACAGTGTCGTCTTCATATTTTAG 1056 44.32 MYGFEALTFNIHGGYLEAIVRGHRAGLLTAADYNNLCQCETLDDIKMHLSATEYGPYLQNEPSPLHTTTIVEKCTLKLVDEYKHMLCQATEPLSTFLEYITYGHMIDNVVLIVTGTLHERDVQELLEKCHPLGMFDSIATLAVAQNMRELYRLVLVDTPLAPYFSECITSEDLDDMNIEIMRNTLYKAYLEDFYRFCQKLGGATAEIMSDLLAFEADRRAVNITINSIGTELTRDDRRKLYSNFGLLYPYGHEELAICEDIDQVRGAMEKYPPYQSIFSKLSYGESQMLDKAFYEEEVKRLCLAFEQQFHYGVFFAYMRLREQEIRNLMWISECVAQNQKSRVHDSVVFIF 351
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 8577984 8582261 - Maker00010828 Lcy10g0408 643919
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy10g0408 351 FunFam V-type proton ATPase subunit 91 205 - -
Lcy10g0408 351 FunFam V-type proton ATPase subunit 14 128 - -
Lcy10g0408 351 Gene3D - 91 199 IPR035067 -
Lcy10g0408 351 PANTHER VACUOLAR ATP SYNTHASE SUBUNIT AC39 1 351 IPR016727 GO:0007034(PANTHER)|GO:0007035(PANTHER)|GO:0016471(PANTHER)|GO:0033179(InterPro)|GO:0046961(InterPro)|GO:1902600(InterPro)
Lcy10g0408 351 Pfam ATP synthase (C/AC39) subunit 16 344 IPR002843 GO:0046961(InterPro)
Lcy10g0408 351 SUPERFAMILY V-type ATP synthase subunit C 14 349 IPR036079 -
Lcy10g0408 351 Gene3D - 206 309 IPR035067 -
Lcy10g0408 351 FunFam V-type proton ATPase subunit 206 309 - -
Lcy10g0408 351 PIRSF V-ATP_synth_D 4 350 IPR016727 GO:0033179(InterPro)|GO:0046961(InterPro)|GO:1902600(InterPro)
Lcy10g0408 351 Gene3D ATP synthase (C/AC39) subunit, domain 3 14 335 IPR044911 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy10g0408 K02146 - csv:101203260 715.687