Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lcy10g0428 | ATGGGGTTACAGCAACGGCCGGATCAGATCCTCCGGTGGCTGTCCGGTGGGTTCTGGGGCGGCGGCCTCAAGGAAGAAGAAGAGGGGAGGCCGAGGAAGTATGGGCCGGACGGGAAGTTGAATGTGGTGGCACTGTCGTCGAAGCCGATATCGACGTCGGCCCCGACGGCGGTGATCGATTTCTCGGCGGAGAAACGTGGGAAAGTCCGGCCGGCGAGCTCCTTAAGTAAATCTAAATATGAAGTGGAGAATTTAGGTGAATGGATACCTTGTTCTGTTGGTGCTAATTTCACACTCCATATCATCACTGTCAACACTGGTGAGGGTCGTTTCGAGATATTGTCGTTGTCGGGATCATTCATGCCGAGCGAGAGTGCAGGAACAAGGAGTAGAACCGGTGGAATGAGCGTCTCCTTAGCAAGTCCAGACGGACGCGTCGTTGGTGGCGGAGTTGCTGGTTTGTTAGTAGCTTCTAGTCCTGTTCAGGTGGTAGTAGGAAGCTTTATATCTGGGAACCAGCATGAGCAAAAGCCGAAGAAGCCGAAACAGGACTTCGTATTACCGGTTTCTCTGCTCTTCCAATCTCCAGCACTGAACCGAAGTCATACACGACGACAACGACGACGACATCTTTTCGTGCTGAAACTTGGTCACCATTGGTTCCAGATTTGA | 672 | 52.53 | MGLQQRPDQILRWLSGGFWGGGLKEEEEGRPRKYGPDGKLNVVALSSKPISTSAPTAVIDFSAEKRGKVRPASSLSKSKYEVENLGEWIPCSVGANFTLHIITVNTGEGRFEILSLSGSFMPSESAGTRSRTGGMSVSLASPDGRVVGGGVAGLLVASSPVQVVVGSFISGNQHEQKPKKPKQDFVLPVSLLFQSPALNRSHTRRQRRRHLFVLKLGHHWFQI | 223 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 9334920 | 9337111 | + | Maker00010842 | Lcy10g0428 | 643939 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lcy10g0428 | 223 | Pfam | Plants and Prokaryotes Conserved (PCC) domain | 105 | 168 | IPR005175 | - | |
Lcy10g0428 | 223 | CDD | DUF296 | 108 | 168 | IPR005175 | - | |
Lcy10g0428 | 223 | ProSiteProfiles | PPC domain profile profile. | 35 | 190 | IPR005175 | - | |
Lcy10g0428 | 223 | Gene3D | - | 87 | 184 | - | - | |
Lcy10g0428 | 223 | PANTHER | AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 | 26 | 108 | IPR039605 | GO:0003680(InterPro) | |
Lcy10g0428 | 223 | SUPERFAMILY | AF0104/ALDC/Ptd012-like | 106 | 174 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lcy10g0428 | Lcy-Chr10:9334920 | Lcy6g2037 | Lcy-Chr6:43325648 | 1.32E-91 | dispersed | |
Lcy10g0428 | Lcy-Chr10:9334920 | Lcy9g0896 | Lcy-Chr9:30102688 | 4.22E-29 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lcy10g0428 | - | - | - | 0.0 |