Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy10g0640 ATGGCGACCTCAAAACCCCAAAGGTCACCTGAGGAGGTCGAAGACATTATCCTTCGCAAGGTCTTCCTCGTCTCTCTCACCGATTCTTCCGATTCCGATTCCAGAACCGTCTATCTCGAGCAAACCGCCGCCGAACTCCTTAGCGAGGGCAAACAATTGAGGATTTCAAGAGATGTAATGGAGCGCATCATTATCGATCGTCTATCCGGCAATTTCTCCTCTGCCGAGCCCCCTTTTCAGTACCTAATCGGCTGCTACCGTCGAGCTCACGACGAGAGTAAGAAAATCGCTTCTATGAAGGATAGGAATTTGCGCTCTGAGATTGAAATTGCGCTCAAGCAAGCCAAGAAGTTGACCGTTTCTTATTGTAGGATTCATTTGGGCAATCCTGACTTGTTTTCGGGTGGGGATTTGGGTACTAAGTCCAACACTTCGCCTTTGCTCCCTTTTATTTTCTCTGAGGTTGGGACCTCGATGGACGGATTTGGGGCTGGTAGCAGCGTTGGTGGAGCCTTTCAGTGCCCTCCGGGTTTCTTGGAGGAGTTTCTCCGGGATTCGGATTTTGATACATTAGACCCCATATTGAAGGGGCTGTATGAGGATTTAAGGGGTAGTGTCCTTAAAGTTTCGGCTCTTGGGAACTTCCAGCAGCCGTTAAGGGCGCTTAGGTTTCTCGTCAGTTTCCCCGTTGGGGCTAAATCTCTTGTGAATCACCCATGGTGGATTCCCACTGGTAAATATTCCAATGGGCGTGTCATTGAAATGACTAGCATTTTGGGACCTTTCTTCCATGTCAGTGCTCTGCCTGACCATGCCATTTTTAAGAGCCAACCTGATGTTGGGCAGCAGTGCTTTTCAGAAGCATCAACTCGTAGACCAGCTGATTTATTGTCTTCATTCACTACAATTAAAACTGTTATGAATAACTTATATGATGGCCTTGCGGAAGTTCTTCTGTCCCTTCTTAAGAACACAGAGACCCGTGAAAATGTTCTCGAGTATCTTGCAGAGGTGATAAATAGAAACTCGTCAAGGGCTCACATACAGGTTGATCCTCTCTCCTGTGCAAGTTCAGGCATGTTTGTTAATCTCAGTGCCATCATGCTACGTCTCTGTGAGCCATTTCTAGATGCAAACTTGACCAAAAGGGATAAAATTGATCCAAAATATGTATGTTATGGTAATCGCTTGGAGTTAAGAGGACTAACTGCTCTACATGCGTCATCGGAAGAAGTTACTGAGTGGATTAATAATGGTGCTCAGTTGAAAACTGATAACTCTGGGCAGTTCAGCGACAGTGAAAGTCGCTTGCTGCAATCACAAGAAGCTTCCAGTTCTGGCAGTAATGTTACTACCGGATCTTCTACTGCAAAGGCAAGATCGGGTAGTGATAAAACTAGGTACCCTTTCATATGTGAGTGCTTCTTTATGACTGCAAGGGTGCTGAATTTGGGCTTGTTAAAAGCATTTTCAGACTTCAAGCATTTAGTACAGGATATATCTAGGTGTGAAGATACATTGTCCACGCTCAAAGCCATGCAGGGACAGGGGCCTGCTCCACAGCTTGAAATGGATATAGCTCGCCTTGAGAAGGAAATAGAGTTGTACTCACAGGAAAAGCTTTGTTATGAAGCTCAAATACTGAGGGATGGGACACTAATCCAGCAAGCTCTTACTTTCTATCGATTAATGGTTGTCTGGTTAGTTGGTTTGGTTGGTGGATTTAAAATGCCTCTTCCCTCAACTTGCCCAATGGAATTTGCATCCATGCCAGAACATTTTGTGGAGGATGCAATGGAATTGCTTATATTTGCTTCTCGGATTCCAAAAGCTTTGGATGGTATCAATTTGGATGATTTTATGAACTTCATTATTATGTTTATGGCAAGTCCAGAATATATCAGAAATCCTTACTTAAGAGCAAAGATGGTTGAAGTTCTGAACTGCTGGATTCCTCGTAGAAGTGGTTCATCTGTAACAGCAACGTTATTTGAAGGCCACCAACTATCACTCGAGTATCTTGTTAGGAATCTTTTAAAGCTCTATGTGGACATCGAGTTCACTGGTTCTCATACACAGTTTTATGACAAGTTCAACATCCGTCATAATATTGCCGAACTTCTCGAATACCTTTGGCAGGTTCCTAGTCATCGCAATGCTTGGAGAATGATTGCCAAGGAAGAGGAGAAGGGTGTTTACTTGAATTTCTTGAACTTCTTAATCAATGATAGCATATATCTTCTTGACGAAAGCCTTAATAAGATTCTCGAACTTAAAGAACTTGAAGCTGAAATGTCAAATACTGCAGAATGGGAGCGGCGGCCTGCTCAAGAGAGGCAGGAGAGAACTCGGCTGTTTCACTCTCAAGAAAATATCATCCGAATTGATATGAAATTAGCAAATGAGGATGTGAGTATGCTGGCATTTACATCAGAGCAAATTACGGCTCCTTTCCTACTCCCAGAGATGGTCGAAAGGGTGGCCAGCATGCTTAATTATTTCCTCCTGCAACTTGTTGGTCCTCAACGAAAATCTCTTAGCTTGAAAGACCCTGAAAAGTACGAATTCCGTCCAAAAGAGTTGCTTAAGCAGGCAAGTCAGATTCTAATTTCTACTGTACCCTTTTATTAA 2631 43.52 MATSKPQRSPEEVEDIILRKVFLVSLTDSSDSDSRTVYLEQTAAELLSEGKQLRISRDVMERIIIDRLSGNFSSAEPPFQYLIGCYRRAHDESKKIASMKDRNLRSEIEIALKQAKKLTVSYCRIHLGNPDLFSGGDLGTKSNTSPLLPFIFSEVGTSMDGFGAGSSVGGAFQCPPGFLEEFLRDSDFDTLDPILKGLYEDLRGSVLKVSALGNFQQPLRALRFLVSFPVGAKSLVNHPWWIPTGKYSNGRVIEMTSILGPFFHVSALPDHAIFKSQPDVGQQCFSEASTRRPADLLSSFTTIKTVMNNLYDGLAEVLLSLLKNTETRENVLEYLAEVINRNSSRAHIQVDPLSCASSGMFVNLSAIMLRLCEPFLDANLTKRDKIDPKYVCYGNRLELRGLTALHASSEEVTEWINNGAQLKTDNSGQFSDSESRLLQSQEASSSGSNVTTGSSTAKARSGSDKTRYPFICECFFMTARVLNLGLLKAFSDFKHLVQDISRCEDTLSTLKAMQGQGPAPQLEMDIARLEKEIELYSQEKLCYEAQILRDGTLIQQALTFYRLMVVWLVGLVGGFKMPLPSTCPMEFASMPEHFVEDAMELLIFASRIPKALDGINLDDFMNFIIMFMASPEYIRNPYLRAKMVEVLNCWIPRRSGSSVTATLFEGHQLSLEYLVRNLLKLYVDIEFTGSHTQFYDKFNIRHNIAELLEYLWQVPSHRNAWRMIAKEEEKGVYLNFLNFLINDSIYLLDESLNKILELKELEAEMSNTAEWERRPAQERQERTRLFHSQENIIRIDMKLANEDVSMLAFTSEQITAPFLLPEMVERVASMLNYFLLQLVGPQRKSLSLKDPEKYEFRPKELLKQASQILISTVPFY 876
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 18399895 18405188 - Maker00015699 Lcy10g0640 644151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy10g0640 876 MobiDBLite consensus disorder prediction 426 463 - -
Lcy10g0640 876 Pfam Ubiquitin elongating factor core 259 870 IPR019474 GO:0000151(InterPro)|GO:0006511(InterPro)|GO:0016567(InterPro)|GO:0034450(InterPro)
Lcy10g0640 876 Coils Coil 519 546 - -
Lcy10g0640 876 PANTHER UBIQUITINATION FACTOR E4 8 871 IPR045132 GO:0000151(InterPro)|GO:0000209(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0030433(PANTHER)|GO:0034450(InterPro)|GO:0034450(PANTHER)|GO:0036503(InterPro)
Lcy10g0640 876 MobiDBLite consensus disorder prediction 426 462 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy10g0640 K10597 - csv:101211398 1608.58