Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy10g0682 ATGGAGGTTCTGAGAAGAAGGGTTGGCGGCGGTAGGCTGCTGCAGGCGGCGGTAGTGGCGGTGGCGACGGTGGTGCTGCTGCTGGCGGCGGTGCCGAATGTTTTGGCGACACGGTGGACTGTTGGTGGCAACATGGGGTGGACGACCAATTTTAACTACACTATCTGGGCTCAGGAGAAGCACTTCTATTATGATGACTGGCTCTTTTTTGTGTATGACAGGAACCAAATGAATGTGTTGGAGGTGAACAAGACAGACTATGAGAGTTGCAATTCAGATCACCCACTCCACAATTACACCACAGGAGCTGGAAGAGATGTGGTTCATTTGAATGTGACCAGGCCCTATTACTTCATAAGTGGCAAGGGCTTTTGCTTTGGAGGCATGAAGCTCGCTATTCACGTTGAACACCTACCTCCCCCGCCCTCGACCTCGCCCTTGAACGAGAAGAGCAGTTCTCCAAGATCTAGCCACATTGCCCACACCCCATTCCTTTTCACTGCTGTTTTCGCCATCGCTGCTCTATGGGAAGCTTTCGCCCGGATCTGGTAG 552 52.54 MEVLRRRVGGGRLLQAAVVAVATVVLLLAAVPNVLATRWTVGGNMGWTTNFNYTIWAQEKHFYYDDWLFFVYDRNQMNVLEVNKTDYESCNSDHPLHNYTTGAGRDVVHLNVTRPYYFISGKGFCFGGMKLAIHVEHLPPPPSTSPLNEKSSSPRSSHIAHTPFLFTAVFAIAALWEAFARIW 183
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 20093575 20095621 - Maker00015732 Lcy10g0682 644193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy10g0682 183 Pfam Plastocyanin-like domain 47 129 IPR003245 GO:0009055(InterPro)
Lcy10g0682 183 PANTHER BLUE COPPER PROTEIN 27 142 IPR039391 GO:0009055(InterPro)|GO:0046658(PANTHER)
Lcy10g0682 183 SUPERFAMILY Cupredoxins 36 135 IPR008972 -
Lcy10g0682 183 ProSiteProfiles Phytocyanin domain profile. 37 137 IPR003245 GO:0009055(InterPro)
Lcy10g0682 183 FunFam Lamin-like protein 35 138 - -
Lcy10g0682 183 Gene3D - 35 138 IPR008972 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy10g0682 Lcy-Chr10:20093575 Lcy2g1118 Lcy-Chr2:11072245 1.23E-33 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy10g0682 - - - 0.0