Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy10g0819 ATGAACCTCAGAATTGTTGTCTTCTGGATCATACAGATCTCCATCCATGTACTTGGAGTTTTTGCTAAAACCAAGGCCCCTGATGTTTCTGCACTGAATGTGATGTTCACAAGTTTAAATTCACCATCACAACTGAGTGGTTGGCAGTCAAGTGGGGGTGACCCATGTGGCGATTCTTGGGAAGGGATCAAATGCTCAGGATCATCCGTTACTGAAATAAGTTTATCAGACTATGGACTAACTGGATCAATGGGTTACCAGCTCTCTAATTTGGCTTCTGTCACCTACTTTGATTTGAGCAAGAACGACCTCAGCGGCGATATCCCGTATCAGCTCCCTCCTAATGCCGTTCACATCGATCTTTCGGAGAATGGCTTCACTGGTTCTGTGCCGTATTCAATTTCTCAGATGACTGGTCTTCAATTTTTAAATCTTCGTCATAACCAGCTTGGTAACCAATTGAGTGACATGTTTGGCAAGCTTAGTAAACTTCAAACGATGGATCTCTCAGAAAACAAAATTTCAGGAAACTTACCTCTAAGTTTTAAGAAGCTTTCAAGCCTCACAGTGTTGCACATACAAGATAATAAATTTACAGGTTCAATTAATGTTCTTGCTGACCTTCCACTGGATGATTTGAATGTTGCAAATAACAAATTCACTGGATGGATTCCTGACTCTCTTGAAGGCATAGATAATTTGGAGGTTGTAGGAAATTCTTTTTCGTCCGGACCGGCTCCTCCTCCGCCACCGGGCGCAGCTTCTCCGAGCAAAAAGACGGACAAAACGGAGTCGAAGGACAAACCGTCAAGCACAAGCGGGATGGTAATAGCTGGAATAGCGATGGGAGTGTTGGCATTGATAGCGGTTATCATTGCATTGGTGTCAAGAAGGTCTCGGCCGGCTACCCATTTCCTGGATGAAGAGCCAAGCCAACACAGATCCTTCGCGCCACTGACATCCCAAGAGTTGGCCAAAGACGTGCACAAAGACGGGGAAAGAAAATCCTTCAACTCAGATGCTTCTATCGACGTAAAGTCTCTTCAGAAATCCGTGAGTGCGGTCAGGCCTCCGCCGCCTGCTGATCGCATGCAGTCCTTCAGTGATAATCAGTTCGTAAGCCGTATCAACAACAGAAGAAGCACTTCCGTCCATGCTGTTGCTTTCGCTTTGCCTGATTTGCAAACTGCCACCACTAATTTTGCAACGGGTCGCCTGCTTGGTGAGGGCACCATTGGACGTGTTTATAAGGCCAAGTTTGCTGATGGCAGGGTTTTAGCAGTGAAGAAGATAGATTCATCAGTTTTTCAAGGGAGGAGAACAGAAGAATTTTCTGAAGTATTAGCAATAATCTCAAAGCTTCACCACACAAACATCACAGAAGTGGTTGGGTTTTGTTCAGAACAGGGACATCACATGCTGATTTATGAGTTTTTCATGAATGGTTCACTTCATGAGTTTCTACACATGTCTGATGACTTTAGCAAACCACTCACATGGAATACTAGAGTCAGAATTGCTTTGGGGACAGCACGAGCTCTCGAGTACCTTCATGAAGTTTGCTCACCATCCATAATTCACATGAATATCAAGTCCTCTAATATATTACTTGATTCTGAACTCAATCCTCGCCTCTCAGACTTTGGTTTGGCAACTTTTTATAAGAATAGAACCCAAAACTCTGTACAAGGATATGATGCTCCAGAATGCATAAAGGGTGCAAGTTATACAATGAAGAGTGACATTTACAGTTTGGGAGTGGTGATGTTGGAATTGTTGACCGGACGGATGCCTTATGACTCTTCAAAGACAAAGGTGGAACAATGTCTAGTCCGGTGGGCGAGCCCACAGCTGCATGACATAGATGCATTGGACAAAATGGTGGATCCTGCATTGCGAGGGTTATATCCGCCAAAGTCAGTTTCAAGGTTTGCAGATATCATTGCACTTTGCGTTCAATCAGAGCCTGAGTTTCGGCCTCCCATGTCGGAGGTGGTGCAAGCCTTGGTCACTTTGGTTCAACGATCCAGTATGAATATGAGAGATGATCTTGGAGCCTCTCGACGAGGGGATGATTATGACTATTGA 2088 44.44 MNLRIVVFWIIQISIHVLGVFAKTKAPDVSALNVMFTSLNSPSQLSGWQSSGGDPCGDSWEGIKCSGSSVTEISLSDYGLTGSMGYQLSNLASVTYFDLSKNDLSGDIPYQLPPNAVHIDLSENGFTGSVPYSISQMTGLQFLNLRHNQLGNQLSDMFGKLSKLQTMDLSENKISGNLPLSFKKLSSLTVLHIQDNKFTGSINVLADLPLDDLNVANNKFTGWIPDSLEGIDNLEVVGNSFSSGPAPPPPPGAASPSKKTDKTESKDKPSSTSGMVIAGIAMGVLALIAVIIALVSRRSRPATHFLDEEPSQHRSFAPLTSQELAKDVHKDGERKSFNSDASIDVKSLQKSVSAVRPPPPADRMQSFSDNQFVSRINNRRSTSVHAVAFALPDLQTATTNFATGRLLGEGTIGRVYKAKFADGRVLAVKKIDSSVFQGRRTEEFSEVLAIISKLHHTNITEVVGFCSEQGHHMLIYEFFMNGSLHEFLHMSDDFSKPLTWNTRVRIALGTARALEYLHEVCSPSIIHMNIKSSNILLDSELNPRLSDFGLATFYKNRTQNSVQGYDAPECIKGASYTMKSDIYSLGVVMLELLTGRMPYDSSKTKVEQCLVRWASPQLHDIDALDKMVDPALRGLYPPKSVSRFADIIALCVQSEPEFRPPMSEVVQALVTLVQRSSMNMRDDLGASRRGDDYDY 695
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 25136829 25144976 - Maker00020734 Lcy10g0819 644330
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy10g0819 695 SUPERFAMILY Protein kinase-like (PK-like) 381 669 IPR011009 -
Lcy10g0819 695 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 479 683 - -
Lcy10g0819 695 SUPERFAMILY L domain-like 28 236 - -
Lcy10g0819 695 Pfam Leucine rich repeat 156 198 IPR001611 GO:0005515(InterPro)
Lcy10g0819 695 Gene3D Transferase(Phosphotransferase) domain 1 479 689 - -
Lcy10g0819 695 PANTHER LEUCINE RICH REPEAT KINASE 2 269 671 IPR051420 -
Lcy10g0819 695 ProSiteProfiles Protein kinase domain profile. 401 672 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lcy10g0819 695 FunFam protein STRUBBELIG-RECEPTOR FAMILY 3 25 252 - -
Lcy10g0819 695 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 365 478 - -
Lcy10g0819 695 Pfam Leucine rich repeat N-terminal domain 27 66 IPR013210 -
Lcy10g0819 695 MobiDBLite consensus disorder prediction 239 273 - -
Lcy10g0819 695 Pfam Protein kinase domain 403 667 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Lcy10g0819 695 Gene3D Ribonuclease Inhibitor 25 253 IPR032675 -
Lcy10g0819 695 Gene3D Phosphorylase Kinase; domain 1 364 478 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy10g0819 Lcy-Chr10:25136829 Lcy13g0086 Lcy-Chr13:874957 2.85E-195 dispersed
Lcy10g0819 Lcy-Chr10:25136829 Lcy2g1571 Lcy-Chr2:21454477 1.63E-64 wgd
Lcy10g0819 Lcy-Chr10:25136829 Lcy2g2170 Lcy-Chr2:44310144 1.08E-07 wgd
Lcy10g0819 Lcy-Chr10:25136829 Lcy9g0711 Lcy-Chr9:24217776 7.40E-64 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
65371 None None None None Lcy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy10g0819 - - - 0.0