Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy10g0840 ATGGCGGCGTCAACTAAACTCGTTCCGATTAGCCAACATCCGTGTTCTTCTTCTTCTCCTTCTATGACCATCTCCGCTACCGTAGACACAATGTTGGTCAAAGAAGATGGTAAGGATGGAAAGAAACAGCCCTCTCTTCTCCGGCGGACAAGCCAAGCCAACGCCGCCGGCAACTTCAACCACCAGACACGGCGGCTAGTCTCCGGCCAAAGTTCATTGGGCCACAGTGTTGGGTATGCTGTGGCCATTACATTTCTGCCGGTGTGCATATGTTTTAAAGTTCTGCGATACCTTTGGATAGGCTACAAATGGATAGCAAGATTTCTATCCCTTGGATGTTATGCGGTTCTTATTTTCCCTGGTTTTCTTCAAGCTGCATATTATTATCTTTACTCCGGCCAGATTCGAAGAAGCATAAAGTATGGTGATCAACCAAGAAATAGGTTGGATCTATATATTCCAAAAACTGGGGATGGGCAAAAGCCAAGGCCAGTGGTTGCATTTGTAACTGGTGGAGCCTGGATTATAGGCTATAGAGCATGGGGTTGTCTTCTCGGATCACAGTTATCAGAGAGAGGCATTGTAGTAGCCTGCCTTGACTACAGAAATTTCCCCCAAGGAACCATGAGTGATATGATAAAGGATGCTTCTCAAGGCATCTCATTCGTATTCAATAATATTGCCGAGTATGGAGGAGATCCTAACAGGATTTATCTAATGGGACAGTCAGCTGGTGCACATATTGCTGCTTGCACACTTGTAGAGCAGGCAATCAAAGAAGCAGGTGGTCAGAGAGTTTCTTGGAGTGTCTCCAGGATAAAAGGTTTCTTTGGTTTGTCAGGGGGCTCAATTAATGAGCTGCCACCTAGGCGCATGGTCCATCAACCTTTTCCATTGAGCTCCCATGCGGCAGCAATACCTGACATTCAGCAATTCAACCTTCAGGCATTAAGGAACAGTGATATTACGTCTATACTTACCTAG 984 45.83 MAASTKLVPISQHPCSSSSPSMTISATVDTMLVKEDGKDGKKQPSLLRRTSQANAAGNFNHQTRRLVSGQSSLGHSVGYAVAITFLPVCICFKVLRYLWIGYKWIARFLSLGCYAVLIFPGFLQAAYYYLYSGQIRRSIKYGDQPRNRLDLYIPKTGDGQKPRPVVAFVTGGAWIIGYRAWGCLLGSQLSERGIVVACLDYRNFPQGTMSDMIKDASQGISFVFNNIAEYGGDPNRIYLMGQSAGAHIAACTLVEQAIKEAGGQRVSWSVSRIKGFFGLSGGSINELPPRRMVHQPFPLSSHAAAIPDIQQFNLQALRNSDITSILT 327
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 25828844 25838715 + Maker00020714 Lcy10g0840 644351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy10g0840 327 Gene3D alpha/beta hydrolase 128 318 IPR029058 -
Lcy10g0840 327 SUPERFAMILY alpha/beta-Hydrolases 126 299 IPR029058 -
Lcy10g0840 327 MobiDBLite consensus disorder prediction 1 22 - -
Lcy10g0840 327 PANTHER AB HYDROLASE SUPERFAMILY PROTEIN C4A8.06C 49 283 IPR050300 GO:0016298(PANTHER)
Lcy10g0840 327 Pfam BD-FAE 149 257 IPR049492 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy10g0840 Lcy-Chr10:25828844 Lcy12g0168 Lcy-Chr12:2078603 2.81E-87 dispersed
Lcy10g0840 Lcy-Chr10:25828844 Lcy7g0403 Lcy-Chr7:3443914 3.09E-94 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy10g0840 K15889 - csv:101213470 362.844