Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy10g0895 ATGGTGGTGGAGACTCGAGTGTTGACATGGAGGAGGGGGTTCAAGTCCCTTCAGGCGCTGGCAGCCCATGGTTTTCTTTTGTCCTTCACGCTTGCTCTTGCTCTCAAGCTCGACCATGTCGTCCCTTACTCTTGGTGGTTCGTTGCTTTCTCTCAATTTCTTCTTGAACTTTTGTGTTGTTTGCAGAAAATTAGTGGAACCCATTTCTATTTTTGTTTGTCCTGGGCATTAATGTGGACTTTGTGGATTGTCTTTTCACCTCTATGGCTTTTTCATCTAATTGCAGCAAGAGGCAGATTTTCTCTACCTGCTCCATCAATGCCTCATGATCGATATTGGGCACCGTGGCATGCTGTCATGGCAACACCATTACTTGTTGCTTTCGAAGTGCTTCTTTGTATATATTTAGAGTGCAGTAATGTTATAAATTTGAAGATTGTCTTTGTTCCCCTCATGATATTTGAGCTAGCAATTTTGGTCGATAATATCAGGATGTGTAGAGCGTTGGTGCCTGGAGACGAAGAAGACAATGTAAGCGATGAAGTTATATGGGAAACGCTTCCTCACTTCTGGGTCTCAATTTCCATGGTTTTCTTCATCGCTGCAACCCTGTTCACTCTTCTAAAGCTTTGTGGCAATGTAGCTGCTCTGGGCTGGTGGGATTTATTTATAAATTTCTGTATAGCTGAGTGCTTTGCATTTCTTGTTTGCACGAAGTGGTATAATCCTATGATTCATAGGCACTCTCTCGTTAGAGAATCAAGTTCCTCTTCGCTGACTATTAGATACCTTGACTGGGATAGAGGTGTGGTGGTTTCCTCTGACGAGGCTCAACCCCAAGTCAGAGTTTGTAATCTGCAGGACATTGGTGGACACATCATGAAGGTTCCTTTTATCATTTTCCAAATCCTGCTTTTTATGCGCTTAGAGGGAACCCCAAGGAGTGCTTCATATATTCCTTGTCTGGTTCTGTTCTCTCCTCTTTTATTACTGCAAGGAGTGGGTTTTGTATTTGCGGTATATAGGTCAATGGAAAAAATTGTAATTTTACTAGTTGGTGCTCCTACTTCAGTAAGATATCTTGACCTAAGGCTGAAAACTCGTGAACTTTTAGGGTTCATGCACCATGGATCGAGGTTGCTAGGTTGGTGGTCAATTGATGAAGGTAGTCAAGAGGAGCAAGCTAAACTTTATTCTGCTGGAACTTCTGGGTTTGTTTTCCACCCTTCTTAA 1233 42.58 MVVETRVLTWRRGFKSLQALAAHGFLLSFTLALALKLDHVVPYSWWFVAFSQFLLELLCCLQKISGTHFYFCLSWALMWTLWIVFSPLWLFHLIAARGRFSLPAPSMPHDRYWAPWHAVMATPLLVAFEVLLCIYLECSNVINLKIVFVPLMIFELAILVDNIRMCRALVPGDEEDNVSDEVIWETLPHFWVSISMVFFIAATLFTLLKLCGNVAALGWWDLFINFCIAECFAFLVCTKWYNPMIHRHSLVRESSSSSLTIRYLDWDRGVVVSSDEAQPQVRVCNLQDIGGHIMKVPFIIFQILLFMRLEGTPRSASYIPCLVLFSPLLLLQGVGFVFAVYRSMEKIVILLVGAPTSVRYLDLRLKTRELLGFMHHGSRLLGWWSIDEGSQEEQAKLYSAGTSGFVFHPS 410
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 28173131 28187601 + Maker00020748 Lcy10g0895 644406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy10g0895 410 PANTHER TRANSMEMBRANE FRAGILE-X-F-ASSOCIATED PROTEIN 9 405 - -
Lcy10g0895 410 Pfam Transmembrane Fragile-X-F protein 77 331 IPR019396 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy10g0895 Lcy-Chr10:28173131 Lcy2g0454 Lcy-Chr2:3844968 6.23E-147 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy10g0895 - - - 0.0