Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lcy10g1026 | ATGGGTTCGAATTTAGTGCCCCAAAAACCCACCGAAGTCCAATTTCAACCCGAAATAGGAAAAGAAGAAAAGGGCAGAGAAGAAGAAGAGAGAACTGAAGAACTTCTCACCTTCGACTTCCAGTTCCAGAACGAAGCCCAGATTCCATTGCAGCAGCTTGCACCGGAGCTTCCTTCCAATCTCTTCATCTCTGTAGCCGGCGGCAACCCTCTTCTTCCCCATTTCATTCTTCCATATTCGCTGATTATGCCAGACGTGCAAGCCCTTGTGAATGATTTCGTTATCAAGCTCAAGAAGCGTAAAATTGAGGGCTCCTTGGCCACCGCGAAGCATACGGCTGAATTGCTTCGTTCTGTCATTTCGCAGCAGCGAATACCCTACACGAATCAGGCGGCTGCTTTGATTGATGCTGTGAAAGCTGTTGGCGAGCAGCTGATTGCTGCGAATCCTGTTGAGCTTGCTGTGGGTAATATTGCGAGGCGTGTTTTGCACATTATTAGAGAGGAGGATCTTTCTCTCACCACAGCTTCTATAGCTGGGTTGAGCTTAGCAGCAGTTAGTGATGATGAAGATGACAGTGAAAAAGATGATCGCCCGGCCCTCTCAGCTGCTGCTGTTGCAGCTGCTGCAAGAAGCACTTTGCGGCCGCCTTCCTTGCAAACTCTTCTTGAGGACGTTCCTAACCAAGCATCTGTTCATCAAACTTCATCATCTGGAGGTGATTCAGAAGGAAAAAGCAAATCTGCTGATAAAAGTTCGAGGAGTCGGAAACTCAAGCATGATGTAATTGAAGCTGTTAATGAACTTATTCAGGATATTGCAACTTGTCATGAACAAATTGCTGAGCAAGCAGTGGAACACATCCATCAAAAAACAGTATTGGAATTTCTTTGTGCTGCCAAGGAGAAGAAAAGGTCCTTCCGTGTGTTTGTTGCTGAAGGTGCTCCAAGATACCAGGGTCATCTTCTTGCTAAGGAGTTAGTTACAAGAGGTTTACAGACCACACTTATTACTGATTCTGCAGTTTTTGCCATGATCTCCCGGGTGAATATGGTAATAGTTGGTGCTCATGCTGTCATGGCAAATGGTGGTGTCATGGCACCTGTCGGATTGAATATGGTGGCCCTTGCAGCTAAAAGGCATGCTGTTCCTTTTGTTGTACTAGCTGGAAGTCACAAGTTGTGCCCTTTGTATCCTCACAATCCTGAAGTTCTACTCAATGAACTGAGATCCCCGTCAGAGCTACTGGACTTCGGTGAATTTTCAGATTGCATGGACTTTGGAACTAACACTGGTTCTCCTCTTCTCCATGTAGTCAACCCTACGTTTGACTATGTGCCACCATCACTTGTTAGTTTATTTATTACTGATACAGGTGGCCATAACTCATCATACATGTATCGGCTTATTGCTGATTATTATTCAGCTGATGATTTGGTAATCAAACGAAGACCTTCTACAGGGAGCTGA | 1470 | 45.31 | MGSNLVPQKPTEVQFQPEIGKEEKGREEEERTEELLTFDFQFQNEAQIPLQQLAPELPSNLFISVAGGNPLLPHFILPYSLIMPDVQALVNDFVIKLKKRKIEGSLATAKHTAELLRSVISQQRIPYTNQAAALIDAVKAVGEQLIAANPVELAVGNIARRVLHIIREEDLSLTTASIAGLSLAAVSDDEDDSEKDDRPALSAAAVAAAARSTLRPPSLQTLLEDVPNQASVHQTSSSGGDSEGKSKSADKSSRSRKLKHDVIEAVNELIQDIATCHEQIAEQAVEHIHQKTVLEFLCAAKEKKRSFRVFVAEGAPRYQGHLLAKELVTRGLQTTLITDSAVFAMISRVNMVIVGAHAVMANGGVMAPVGLNMVALAAKRHAVPFVVLAGSHKLCPLYPHNPEVLLNELRSPSELLDFGEFSDCMDFGTNTGSPLLHVVNPTFDYVPPSLVSLFITDTGGHNSSYMYRLIADYYSADDLVIKRRPSTGS | 489 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 32383273 | 32391899 | + | Maker00008757 | Lcy10g1026 | 644537 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lcy10g1026 | 489 | MobiDBLite | consensus disorder prediction | 225 | 243 | - | - | |
Lcy10g1026 | 489 | Gene3D | - | 274 | 473 | IPR042529 | - | |
Lcy10g1026 | 489 | MobiDBLite | consensus disorder prediction | 244 | 258 | - | - | |
Lcy10g1026 | 489 | MobiDBLite | consensus disorder prediction | 225 | 258 | - | - | |
Lcy10g1026 | 489 | SUPERFAMILY | NagB/RpiA/CoA transferase-like | 71 | 478 | IPR037171 | - | |
Lcy10g1026 | 489 | FunFam | translation initiation factor eIF-2B subunit beta | 276 | 474 | - | - | |
Lcy10g1026 | 489 | MobiDBLite | consensus disorder prediction | 16 | 30 | - | - | |
Lcy10g1026 | 489 | MobiDBLite | consensus disorder prediction | 1 | 30 | - | - | |
Lcy10g1026 | 489 | Pfam | Initiation factor 2 subunit family | 101 | 461 | IPR000649 | GO:0044237(InterPro) | |
Lcy10g1026 | 489 | PANTHER | TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT BETA | 85 | 480 | IPR051855 | GO:0003743(PANTHER)|GO:0005085(PANTHER)|GO:0005851(PANTHER)|GO:0006413(PANTHER) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lcy10g1026 | Lcy-Chr10:32383273 | Lcy2g2169 | Lcy-Chr2:44303467 | 7.46E-67 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lcy10g1026 | K03754 | - | csv:101220366 | 704.516 |