Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy10g1034 ATGGCGCTCTCTGATAAACCCTCTCGCCAATCTCTCATCCCCAGCTTCCTCTACTCTTCCCCTTCTTCCACTCGCACTCTTCCCCTCAAGAAGATGCTTCAGTCGTCTTCACCCACTCTCGATGCTGTTTCCTCTTCTCCTAAGAGCTTCGTTGTTCCCGCCCCGAGTGAGCCCTCCAAGAAGATCGAGATGTACTCGCCGGCTTTCTACGCTGCTTGTACTTTCGGGGGAATTCTCAGCTGCGGTCTGACTCACATGACTGTTACTCCTCTCGATTTGGTTAAATGCAATATGCAGGTTCGGTTGGCTTGGATTTGTGATCGCTTTCTGCCTGTGGTTGCATTTCTGTTTATGTTTATCTGTGTGTTTTCCCGCTTTGTTATGAGGCCTATGAATGGATTTGCTAGTTGGGTTGTTAACTTCAGTATTATTCTTATTCAGATTGACCCTGCGAAATACAAAAGCATTTCGTCTGGTTTTGGAGTTTTGCTCAAGGAGCAGGGTGTGAGGGGTTTCTTCAGGGGTTGGGTGCCTACCCTCCTCGGATACAGTGCCCAGGGTGCCTGCAAGTTTGGTTTCTACGAGTTCTTTAAGAAGTATTACTCTGATATTGCTGGACCTGAGTACGCGGCTAAGTACAAGACCTTGATCTACTTTGCTGGCTCTGCATCTGCTGAGGTGATTGCTGATGTTGCACTTTGCCCTTTTGAAGCAGTGAAGGTTCGAGTTCAAACTCAACCTGGTTTTGCTAGAGGACTAGCAGATGGACTTCCTAAGTTTGTCAAATCTGAAGGAACCCTAGGGCTGTACAAGGGTATTGTTCCACTCTGGGGAAGACAGATTCCATACACCGTGATGAAGTTTGCATCCTTTGAGACAATAGTTGAGATGATATACAAATATGCCATTCCCACACCAAAGGACCAGTGCAGCAAATCTCTCCAGCTTGGTGTTAGTTGTGCTGGTGGATACGTGGCTGGTGTTTTCTGTGCTATTGTGTCTCATCCTGCCGATAATCTTGTGTCCTTCCTCAACAATGCCAAAGGAGCAACTTTTGGTGATGCTGTTAAGAAGCTTGGATTATGGGGTCTCTTCACCCGTGGTCTACCCCTTCGTATCGTTATGATTGGAACTCTTACTGGTGCTCAGTGGGGTATTTATGATGCATTCAAAGTATTTGTTGGACTTCCTACTACTGGTGGTGTTGCTCCTGCTGCCCCTGCCCCTGCTGCTGAGCTCGCAAAGGCGTAA 1251 47.48 MALSDKPSRQSLIPSFLYSSPSSTRTLPLKKMLQSSSPTLDAVSSSPKSFVVPAPSEPSKKIEMYSPAFYAACTFGGILSCGLTHMTVTPLDLVKCNMQVRLAWICDRFLPVVAFLFMFICVFSRFVMRPMNGFASWVVNFSIILIQIDPAKYKSISSGFGVLLKEQGVRGFFRGWVPTLLGYSAQGACKFGFYEFFKKYYSDIAGPEYAAKYKTLIYFAGSASAEVIADVALCPFEAVKVRVQTQPGFARGLADGLPKFVKSEGTLGLYKGIVPLWGRQIPYTVMKFASFETIVEMIYKYAIPTPKDQCSKSLQLGVSCAGGYVAGVFCAIVSHPADNLVSFLNNAKGATFGDAVKKLGLWGLFTRGLPLRIVMIGTLTGAQWGIYDAFKVFVGLPTTGGVAPAAPAPAAELAKA 416
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 32454129 32457993 - Maker00008402 Lcy10g1034 644545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy10g1034 416 Gene3D Mitochondrial carrier domain 68 394 IPR023395 -
Lcy10g1034 416 ProSiteProfiles Solute carrier (Solcar) repeat profile. 68 200 IPR018108 -
Lcy10g1034 416 SUPERFAMILY Mitochondrial carrier 71 389 IPR023395 -
Lcy10g1034 416 ProSiteProfiles Solute carrier (Solcar) repeat profile. 213 297 IPR018108 -
Lcy10g1034 416 MobiDBLite consensus disorder prediction 1 23 - -
Lcy10g1034 416 FunFam Phosphate carrier protein, mitochondrial 117 394 - -
Lcy10g1034 416 Pfam Mitochondrial carrier protein 213 300 IPR018108 -
Lcy10g1034 416 Pfam Mitochondrial carrier protein 145 203 IPR018108 -
Lcy10g1034 416 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 47 403 IPR044677 GO:0005315(InterPro)|GO:0005315(PANTHER)|GO:0031305(PANTHER)|GO:0035435(PANTHER)|GO:1990547(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy10g1034 Lcy-Chr10:32454129 Lcy2g0022 Lcy-Chr2:185661 1.41E-187 dispersed
Lcy10g1034 Lcy-Chr10:32454129 Lcy10g0054 Lcy-Chr10:784161 7.04E-199 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy10g1034 K15102 - csv:101221771 650.588