Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lcy10g1034 | ATGGCGCTCTCTGATAAACCCTCTCGCCAATCTCTCATCCCCAGCTTCCTCTACTCTTCCCCTTCTTCCACTCGCACTCTTCCCCTCAAGAAGATGCTTCAGTCGTCTTCACCCACTCTCGATGCTGTTTCCTCTTCTCCTAAGAGCTTCGTTGTTCCCGCCCCGAGTGAGCCCTCCAAGAAGATCGAGATGTACTCGCCGGCTTTCTACGCTGCTTGTACTTTCGGGGGAATTCTCAGCTGCGGTCTGACTCACATGACTGTTACTCCTCTCGATTTGGTTAAATGCAATATGCAGGTTCGGTTGGCTTGGATTTGTGATCGCTTTCTGCCTGTGGTTGCATTTCTGTTTATGTTTATCTGTGTGTTTTCCCGCTTTGTTATGAGGCCTATGAATGGATTTGCTAGTTGGGTTGTTAACTTCAGTATTATTCTTATTCAGATTGACCCTGCGAAATACAAAAGCATTTCGTCTGGTTTTGGAGTTTTGCTCAAGGAGCAGGGTGTGAGGGGTTTCTTCAGGGGTTGGGTGCCTACCCTCCTCGGATACAGTGCCCAGGGTGCCTGCAAGTTTGGTTTCTACGAGTTCTTTAAGAAGTATTACTCTGATATTGCTGGACCTGAGTACGCGGCTAAGTACAAGACCTTGATCTACTTTGCTGGCTCTGCATCTGCTGAGGTGATTGCTGATGTTGCACTTTGCCCTTTTGAAGCAGTGAAGGTTCGAGTTCAAACTCAACCTGGTTTTGCTAGAGGACTAGCAGATGGACTTCCTAAGTTTGTCAAATCTGAAGGAACCCTAGGGCTGTACAAGGGTATTGTTCCACTCTGGGGAAGACAGATTCCATACACCGTGATGAAGTTTGCATCCTTTGAGACAATAGTTGAGATGATATACAAATATGCCATTCCCACACCAAAGGACCAGTGCAGCAAATCTCTCCAGCTTGGTGTTAGTTGTGCTGGTGGATACGTGGCTGGTGTTTTCTGTGCTATTGTGTCTCATCCTGCCGATAATCTTGTGTCCTTCCTCAACAATGCCAAAGGAGCAACTTTTGGTGATGCTGTTAAGAAGCTTGGATTATGGGGTCTCTTCACCCGTGGTCTACCCCTTCGTATCGTTATGATTGGAACTCTTACTGGTGCTCAGTGGGGTATTTATGATGCATTCAAAGTATTTGTTGGACTTCCTACTACTGGTGGTGTTGCTCCTGCTGCCCCTGCCCCTGCTGCTGAGCTCGCAAAGGCGTAA | 1251 | 47.48 | MALSDKPSRQSLIPSFLYSSPSSTRTLPLKKMLQSSSPTLDAVSSSPKSFVVPAPSEPSKKIEMYSPAFYAACTFGGILSCGLTHMTVTPLDLVKCNMQVRLAWICDRFLPVVAFLFMFICVFSRFVMRPMNGFASWVVNFSIILIQIDPAKYKSISSGFGVLLKEQGVRGFFRGWVPTLLGYSAQGACKFGFYEFFKKYYSDIAGPEYAAKYKTLIYFAGSASAEVIADVALCPFEAVKVRVQTQPGFARGLADGLPKFVKSEGTLGLYKGIVPLWGRQIPYTVMKFASFETIVEMIYKYAIPTPKDQCSKSLQLGVSCAGGYVAGVFCAIVSHPADNLVSFLNNAKGATFGDAVKKLGLWGLFTRGLPLRIVMIGTLTGAQWGIYDAFKVFVGLPTTGGVAPAAPAPAAELAKA | 416 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 32454129 | 32457993 | - | Maker00008402 | Lcy10g1034 | 644545 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lcy10g1034 | 416 | Gene3D | Mitochondrial carrier domain | 68 | 394 | IPR023395 | - | |
Lcy10g1034 | 416 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 68 | 200 | IPR018108 | - | |
Lcy10g1034 | 416 | SUPERFAMILY | Mitochondrial carrier | 71 | 389 | IPR023395 | - | |
Lcy10g1034 | 416 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 213 | 297 | IPR018108 | - | |
Lcy10g1034 | 416 | MobiDBLite | consensus disorder prediction | 1 | 23 | - | - | |
Lcy10g1034 | 416 | FunFam | Phosphate carrier protein, mitochondrial | 117 | 394 | - | - | |
Lcy10g1034 | 416 | Pfam | Mitochondrial carrier protein | 213 | 300 | IPR018108 | - | |
Lcy10g1034 | 416 | Pfam | Mitochondrial carrier protein | 145 | 203 | IPR018108 | - | |
Lcy10g1034 | 416 | PANTHER | SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED | 47 | 403 | IPR044677 | GO:0005315(InterPro)|GO:0005315(PANTHER)|GO:0031305(PANTHER)|GO:0035435(PANTHER)|GO:1990547(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lcy10g1034 | Lcy-Chr10:32454129 | Lcy2g0022 | Lcy-Chr2:185661 | 1.41E-187 | dispersed | |
Lcy10g1034 | Lcy-Chr10:32454129 | Lcy10g0054 | Lcy-Chr10:784161 | 7.04E-199 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lcy10g1034 | K15102 | - | csv:101221771 | 650.588 |