Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy10g1306 ATGGTAACATCGGGGCCACCCACTCCTATGGGTGGTGGTGCACAGTCTGTTTCTCCCTCACTTCTGCGATCTAATTCAGGATTGCTGGGGGTTCAAGGTGGTCTGCTACCTTCTCAAGCAGCCTTTTCTTCACTTGTATCACCTCGCAATCAGTTCAATAATATGAATATGCTTGGTAATATGTCCAATGTGTCATCTCTCCTTAATCAATCATTTGGAAATGGGGCTCCTAATTCTGGACTTCCATGTCCTGGCAGTAGCCACCCTGGTGGTATCGACCCTGGTGCGGAGCCAGACCCTCTTTCTGGTGTTGGCAATGGAATGAGCTTTAATAATCCTTCATCGTCATTTGTAGCATCAAATATGGCGAACCCCGTTTCATCTGTCCAAGGGCAGAACCCACAATTTTCTAACCATTCTAGCAGCCAGATGTTATCAGATCAGCAGCAGTCACAACAACAACTTGAACCCCAGAACTTTCAACATAGTCAACAGTCGATGGAACAACCTGAAGACAACAACATAGATTTCTGGAGGAAATTTGTTAACGAGTACTTTGCACCTCATGCCAAAAAAAAGTGGTGTGTTTCCATGTATGGAAGTGGGCGACAAACAACTGGAGTTTTTCCTCAGGATGTATGGCATTGTGAAATATGCAATCGCAAGCCTGGCCGTGGTTTTGAAGCAACTGCTGAAGTTCTTCCCAGGCTTTTTAAGATCAAGTATGAAAGTGGTACTATGGAGGAACTACTTTATCTTGACATGCCTCGTGAATACCATAATGCATCTGGTCAGATCGTCCTGGATTATGCAAAAGCAATACAGGAAAGTGTTTTTGAGCAACTTCGTGTTGTTCGCGATGGCCAACTTCGAATTGTTTTTTCTCCAGACCTTAAGATATGTTCATGGGAATTCTGTGCTCGACGCCATGAAGAACTGATTCCTAGGAGATTATTGATACCTCAGGTTAGTCAACTTGGGGTAGCAGCTCAAAAGTACCAGACTGCCATTCAAAATGCATCATCCAATTTATCAACTCCTGAATTGCAAAATAATTGTAACATGTTTGTGGCTTCAGCGCGACAATTAGCTAAAGCCTTGGAAGTTCCGCTGGTAAATGACTTGGGATATACAAAGAGATACGTACGTTGTCTTCAGATATCCGAAGTGGTTAATAGCATGAAGGATTTGATTGATTACAGCAAAGAAACAGGGATTGGGCCAATGGACGCAAAAGATAGTCTAGCCAAGTTTCCTCGGAGGACTAGTTCATCATCAGGGCTTACAAATCAAGCTCAAGTTTCTGATGAGCAGCAGCAGCAACAACAACAACAGCAATCATCCATGGTCCAGCACTCAAATAATAACCAGAGTTCTGTCCAGGCTTCTGCAGTGCAGCTTACGGCTAGCAATGGTGTGACCAGTGTAAATAACACCGTCAACCAACCTTCAACATCAAACTCAGCGAGCACCATTGTTGGGCTTCTTCACCAGAATTCTATGAACTCCAGACAGCAGCAGAACTCTATGGCAAATCCTAGCAACTCATATGGGGGAAGTTCTGTTCAGATCCCATCTCCTGGTTCTTCCAGTACAATTCCTCCTACACCACCGAACCCTTCTACATTCCAGCCACCAACTCCCACATCATCTAACAATCTTTCACAACCATCGCATACTGCTGCGAAAAATGCCAATCCGATGAGTGCTGCTAATTCTCCGGCAAATATCTCCATGCAACAACCTGCTTTATCCGGAGATGCTGATCCTAGTGATACACAGTCCTCCGTGCAAAAGATCTTACAAGAGATGATGATGAATAGTCAAATGAATGGCCCGACAAGTCTGGTTGGTGTTGGTTCGCTGGTCAATGATATGAAAAACGTGAATGGGGTCTTACCTACAAGCAATGCAGGTCTCAACAATGGGAACTGTATAGGTGGTAATGGAACAACCAACGGTGGCTCAGGCATGGGAGGTGGCGGATATGGATCAATGGGGAGTGGGCTTGGGCAGCCTGCCATGGTCAGTGGAATGAGAACTGCAATGGGAAATAACTCCATAATGAACGGACGAATAGGAATGGCATCGCTCGCTCGAGAACAAAGCATGAATGGTCAACCGCAGGATTTGGGAAACCAGCTTCTAAGTGGACTAGGAGCTGTAAATGGCTTTAGTAATCTCCAATTTGACTGGAAGCCATCCCCATGA 2211 44.96 MVTSGPPTPMGGGAQSVSPSLLRSNSGLLGVQGGLLPSQAAFSSLVSPRNQFNNMNMLGNMSNVSSLLNQSFGNGAPNSGLPCPGSSHPGGIDPGAEPDPLSGVGNGMSFNNPSSSFVASNMANPVSSVQGQNPQFSNHSSSQMLSDQQQSQQQLEPQNFQHSQQSMEQPEDNNIDFWRKFVNEYFAPHAKKKWCVSMYGSGRQTTGVFPQDVWHCEICNRKPGRGFEATAEVLPRLFKIKYESGTMEELLYLDMPREYHNASGQIVLDYAKAIQESVFEQLRVVRDGQLRIVFSPDLKICSWEFCARRHEELIPRRLLIPQVSQLGVAAQKYQTAIQNASSNLSTPELQNNCNMFVASARQLAKALEVPLVNDLGYTKRYVRCLQISEVVNSMKDLIDYSKETGIGPMDAKDSLAKFPRRTSSSSGLTNQAQVSDEQQQQQQQQQSSMVQHSNNNQSSVQASAVQLTASNGVTSVNNTVNQPSTSNSASTIVGLLHQNSMNSRQQQNSMANPSNSYGGSSVQIPSPGSSSTIPPTPPNPSTFQPPTPTSSNNLSQPSHTAAKNANPMSAANSPANISMQQPALSGDADPSDTQSSVQKILQEMMMNSQMNGPTSLVGVGSLVNDMKNVNGVLPTSNAGLNNGNCIGGNGTTNGGSGMGGGGYGSMGSGLGQPAMVSGMRTAMGNNSIMNGRIGMASLAREQSMNGQPQDLGNQLLSGLGAVNGFSNLQFDWKPSP 736
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 35943322 35950148 - Maker00008717 Lcy10g1306 644817
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy10g1306 736 PANTHER LIM DOMAIN-BINDING PROTEIN 163 727 IPR029005 GO:0000122(PANTHER)|GO:0005634(PANTHER)|GO:0005667(PANTHER)|GO:0045944(PANTHER)
Lcy10g1306 736 MobiDBLite consensus disorder prediction 502 596 - -
Lcy10g1306 736 MobiDBLite consensus disorder prediction 105 170 - -
Lcy10g1306 736 Pfam LIM-domain binding protein 164 411 IPR029005 -
Lcy10g1306 736 MobiDBLite consensus disorder prediction 530 545 - -
Lcy10g1306 736 MobiDBLite consensus disorder prediction 418 462 - -
Lcy10g1306 736 MobiDBLite consensus disorder prediction 502 529 - -
Lcy10g1306 736 MobiDBLite consensus disorder prediction 73 170 - -
Lcy10g1306 736 MobiDBLite consensus disorder prediction 403 462 - -
Lcy10g1306 736 MobiDBLite consensus disorder prediction 546 596 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy10g1306 Lcy-Chr10:35943322 Lcy6g0188 Lcy-Chr6:1695857 4.32E-79 dispersed
Lcy10g1306 Lcy-Chr10:35943322 Lcy11g0199 Lcy-Chr11:2383979 1.42E-42 wgd
Lcy10g1306 Lcy-Chr10:35943322 Lcy9g0989 Lcy-Chr9:32984450 2.46E-288 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy10g1306 - - - 0.0