Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy10g1511 ATGGCTTCCAACACCTTGATGAGCTGCGGCATTGCCACCACCGCCTTCCCTTCTGTCCTATCTTCCTCCAAGTCTAAATTCGCCGCCGCTGTCCCGATTTCCGGCGTCGCCGTCAATGCCTCCTCGCGCTTCTCCATGTCCGCCGAGTGGATGCCCGGACAGCCCCGCCCGCCGTACCTCGGCTCTGCCCCCGGTGATTTTGGCTTTGACCCTCTTCGGTTGGGAGAAGTGCCAGAGAATCTCGAGAGATTCAAGGAGTCTGAGCTAATTCACTGCAGATGGGCCATGCTTGCTGTTCCAGGAATTTTGGTACCTGAGGCGTTGGGATTGGGCAATTGGGTGAAAGCTCAGGAATGGGCAGCCATTCCAGGAGGCCAAGCTACCTACTTGGGGCAACCAGTTCCATGGGGAACTTTGCCTACCATTTTGGTCATTGAGTTCCTTGCCATTGCCTTCGTAGAGCACCACGCAGCATGGAAAAAGACCCTGAGAAGAAGTCGGTTGGCGCTGTTGGCTTTTGTTGGGTTCTGTGTGCAACAATCGGCATACCCAGGAACAGGGCCATTTTAG 570 55.61 MASNTLMSCGIATTAFPSVLSSSKSKFAAAVPISGVAVNASSRFSMSAEWMPGQPRPPYLGSAPGDFGFDPLRLGEVPENLERFKESELIHCRWAMLAVPGILVPEALGLGNWVKAQEWAAIPGGQATYLGQPVPWGTLPTILVIEFLAIAFVEHHAAWKKTLRRSRLALLAFVGFCVQQSAYPGTGPF 189
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 39552294 39553750 - Maker00006906 Lcy10g1511 645022
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy10g1511 189 Gene3D Chlorophyll a/b binding protein domain 51 189 - -
Lcy10g1511 189 Pfam Chlorophyll A-B binding protein 57 157 IPR022796 -
Lcy10g1511 189 SUPERFAMILY Chlorophyll a-b binding protein 40 188 - -
Lcy10g1511 189 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 12 156 IPR001344 GO:0009416(PANTHER)|GO:0009765(InterPro)|GO:0009768(PANTHER)|GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy10g1511 Lcy-Chr10:39552294 Lcy10g1770 Lcy-Chr10:42098067 1.54E-118 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy10g1511 K08907 - csv:101211428 339.347