Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy10g1576 ATGTACTTGAACTCAGAAATCTCGGCTCGATCAAGTGACCACTCATTGTACATCAGTTCAGAAACTGGAACTCTGTTTGTTTTTTTCACGGGTGGAATCGTATTCTTGACACTTATTGTAAATGGTTCAACCACACAATTCATTTTACATCTTCTGCATATGGACAAGCTCTCTGTGGCTAAGAAACGCATATTGGATTATACAAAATATGAGATGCTGAACAAAGCATTGGATGCCTTTGGAGATCTTGGAGATGATGAGGAATTGGGACCTGCCGACTGGCCTACAGTAAAAAGATATATCACAAGTCTCAGTCATGTGGAGGGGGAACCACTGCACCCGCACAATGCATTTGAAAGTGATCAAAATGTTCACTCTATGAATTTGAGAGACATTCGTATACGACTTTTGAATGGTGTTCAAGCTGCTTACTGGGGGATGCTTGATGAGGGAAGGATAAACCAAGCTACTGCAAATATCTTGATGCAATCTGTGGATGAAGCCCTTGATCTGGTTGCAAATGAGCCCTTATGTGATTGGAAGGGTTTAAAAGCTAACGTCCATTTTCCAAACTATTATAAGTTCCTTCAGACAAGCATTTTCCCTCAGAAGTTGGTTACGTATTTCACTGTGGAAAGATTGGAATCAGGATGTTATATATGTGCTGCATTTCTCCGTGCACATAGAATTGCGAGAAGACAGCTTCATGAGTTTATAGGTGATAGTGATATTGCTTCTACTGTTATTAATGAAAGTGAGGCTGAAGGTGAAGAAGCACGAAAGTTTCTGGAAGATGTTCGTGAGACATTTCCTCAGGTTCTGCGTGTTGTTAAAACCAGACAAGTAACATATTCAGTACTCAATCATTTAATTGAATATGTCCAAAATCTAGAGAAGGTTGGCCTATTAGAAGAGAAAGAGATGATGCATCTTCATGATGCTGTCCAGACTGACTTGAAAAGGCTTCTAAGAAATCCTCCTCTGGCAAAGGTTCCAAAAATGCGCAACTTAATTAGTGTCCATCCATTTCTTGGGGCACTTCCTCCTCTAGTGCGTGAACCACTTGAAGTTTCAACAAAAGAAGTGATGAAACTACGTGGTGTGACACTTTACAAGGAAGGTTCAAAGCCCAGTGGTGTTTGGTTGATATCCAACGGAGTGGTAAAGTGGGAAAGTAAGAGCATGAGAAACAAGTTCTCCTTGCACCCGACATTTACTCATGGAAGTACTTTAGGCCTATATGAATTGCTTACTGGGAAGCCATGCATCTGTGACATGATAACAGATTCTGTTGTTTTCGCATTTTTTATTGAACATGACAAGTTTCTTTCGCTACTTAGATCAGATCCTTCGGTGGAAGATTTCTTGTGGCAGGAAAGTTCCATTGTTCTTGCCAAACTTTTGTTTCCACAAGTGTTCGAGAAAATGGAAATGAGAGATCTGAGAGTTCTTGTTGTTGAAAGGTCAGTAATGACTACGTATATAGCAGGAGAAACAATAGAAATTCCACGCCATTCTATTGGCCTTTTGTTAGAAGGATTTATCAAAAGTCATGGCATCCAAGAGGAACTGATAACATCACCTGCCGTGTTGTTCTCTTCGCATGGGAATCAGAGTTTCCATAATATGGAAAACTCAGGAGCGATGTTGACCATTGTAAAGTTGGGTGGAGCTGAAAGGCTACTGTTGAAGTTTCTGGCAATGGTCTCATGGACAGGAAGAACCGATAGTATTTGGAAACTAGACTACAGCTGGATGAGTGGTTCTAGTTTTTCTCATCAAGGCTTCTGTTATGAAGTTGAAACAAGATCAAGAGTAATCATTTTTGACATGGCTGCCCTTCAATCAGATAACATTTTAAATCGGTCATCGTCATTTATACATCCTGTCGATCACCCTCAAAGATCTCTGAGCAGAGATCACTCTGGTCTTATGAGTTGGCCTGAACTGTTTTCCAAGCCAAGACCATCACAGAAGCAGAAATCTGATAGAACTGAGCGTCCAGCTGATAGCTTGTCTGCAAAGGCAATGCAGCTTAGCATATACGGTAGCATGGTTGATATTCGTCAGCGGACTAAGAGTTTTCCAGGCCATATTGCCGAACCATCTCTTAGCCGGTCAAATCCTGCAATTCCTTCACATAAATATGTTCCCTTTCCATCTGTCAAATCAGAAGGAGCTGCTACAATGAAAAAGAGGCTGGATGCAAGAAAGTTACCAATAAGCACTGTTCGACCTCCACAAGAAAAACCAGTGCATAATGAGATCAATACAAGGGATGATTCAAGTGAGGAATCAGGTGGTGAGGATGATGTCATAGTGAGAATTGATTCACCAAGTGTGCTTTCGTTTCACCAGGTTCCATGA 2367 40.98 MYLNSEISARSSDHSLYISSETGTLFVFFTGGIVFLTLIVNGSTTQFILHLLHMDKLSVAKKRILDYTKYEMLNKALDAFGDLGDDEELGPADWPTVKRYITSLSHVEGEPLHPHNAFESDQNVHSMNLRDIRIRLLNGVQAAYWGMLDEGRINQATANILMQSVDEALDLVANEPLCDWKGLKANVHFPNYYKFLQTSIFPQKLVTYFTVERLESGCYICAAFLRAHRIARRQLHEFIGDSDIASTVINESEAEGEEARKFLEDVRETFPQVLRVVKTRQVTYSVLNHLIEYVQNLEKVGLLEEKEMMHLHDAVQTDLKRLLRNPPLAKVPKMRNLISVHPFLGALPPLVREPLEVSTKEVMKLRGVTLYKEGSKPSGVWLISNGVVKWESKSMRNKFSLHPTFTHGSTLGLYELLTGKPCICDMITDSVVFAFFIEHDKFLSLLRSDPSVEDFLWQESSIVLAKLLFPQVFEKMEMRDLRVLVVERSVMTTYIAGETIEIPRHSIGLLLEGFIKSHGIQEELITSPAVLFSSHGNQSFHNMENSGAMLTIVKLGGAERLLLKFLAMVSWTGRTDSIWKLDYSWMSGSSFSHQGFCYEVETRSRVIIFDMAALQSDNILNRSSSFIHPVDHPQRSLSRDHSGLMSWPELFSKPRPSQKQKSDRTERPADSLSAKAMQLSIYGSMVDIRQRTKSFPGHIAEPSLSRSNPAIPSHKYVPFPSVKSEGAATMKKRLDARKLPISTVRPPQEKPVHNEINTRDDSSEESGGEDDVIVRIDSPSVLSFHQVP 788
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 40116572 40128535 - Maker00006925 Lcy10g1576 645087
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy10g1576 788 SUPERFAMILY cAMP-binding domain-like 332 457 IPR018490 -
Lcy10g1576 788 MobiDBLite consensus disorder prediction 734 788 - -
Lcy10g1576 788 PANTHER SODIUM/HYDROGEN EXCHANGER 20 375 IPR018422 GO:0005886(PANTHER)|GO:0006812(InterPro)|GO:0009941(PANTHER)|GO:0015385(PANTHER)|GO:0015385(InterPro)|GO:0015386(PANTHER)|GO:0016020(InterPro)|GO:0051453(PANTHER)|GO:0071805(PANTHER)|GO:0098719(PANTHER)|GO:1902600(InterPro)
Lcy10g1576 788 Gene3D Jelly Rolls 308 468 IPR014710 -
Lcy10g1576 788 MobiDBLite consensus disorder prediction 656 670 - -
Lcy10g1576 788 MobiDBLite consensus disorder prediction 647 673 - -
Lcy10g1576 788 Pfam Cyclic nucleotide-binding domain 366 449 IPR000595 -
Lcy10g1576 788 ProSiteProfiles cAMP/cGMP binding motif profile. 343 446 IPR000595 -
Lcy10g1576 788 CDD CAP_ED 343 452 IPR000595 -
Lcy10g1576 788 FunFam Sodium/hydrogen exchanger 7 330 467 - -
Lcy10g1576 788 MobiDBLite consensus disorder prediction 752 772 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy10g1576 K14726 - csv:101209966 1322.76