Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy10g1580 ATGGCGGGAGTACAATTGCTGGAAATGTTTCCATACCGAGAGCTGGAAGAGGGAGCCACTGGTTCGTCTGATTGGAATCCAACTGATGCTGTGCTTTTTGTTGGACTGAGTTTGGTGCTTGGAATTGCTTGCAGACACCTATTGCGAGGCACCAGAGTTCCTTATACAGTTGCCTTGCTCGTTCTTGGCATAGTTCTTGGATCCATTGAATATGGCACACATCATCGATTGGGAAAGATAGGAGATGGTATTCGTCTCTGGGCAAAAATTGATCCTGATCTATTATTGGCCGTTTTCCTTCCTGCTCTGCTGTTCGAGAGTTCCTTTTCAATGGAAGTGCACCAAATAAAGAGGTGTCTGGCCCAGATGATCTTATTAGCTGGTCCAGGTGTTTTAATTTCAACCTTCTTGCTTGGATCTGCTTTCAAGCTCACTTTCCCTTATAATTGGGACTGGAAAACATCATTGTTGCTTGGGGGACTTCTGAGTGCCACGGATCCTGTGGCTGTTGTAGCTCTATTGAAAGAGCTAGGAGCAAGTAAAAAACTGAACACGATAATAGAGGGAGAATCCTTGATGAATGATGGAACAGCAATTGTGGTTTATCAACTTTTTTATCAAATGGTCCTTGGAAAGAGCTTTAACTGGGGAGCCATAATCAAATATCTCACACAAGTTTCGCTGGGGGCTTTGGGAATTGGTCTTGCTTTTGGGATTGCATCTGTTTTATGGCTCGGGTTCATTTTCAACGACACAGTGATAGAGATTGCATTAACACTTGCTGTGAGCTATATTGCTTACTTCACTAATGTAGTCCTGATTAGGTTTTGGCATTCTCTAACGGAGGAAGACTCCTTATGGCACAAGGTAACTGATAAGAAGAATGACAGTGTTCCTCCTGGCTGGTTTACTCTGTAA 918 43.36 MAGVQLLEMFPYRELEEGATGSSDWNPTDAVLFVGLSLVLGIACRHLLRGTRVPYTVALLVLGIVLGSIEYGTHHRLGKIGDGIRLWAKIDPDLLLAVFLPALLFESSFSMEVHQIKRCLAQMILLAGPGVLISTFLLGSAFKLTFPYNWDWKTSLLLGGLLSATDPVAVVALLKELGASKKLNTIIEGESLMNDGTAIVVYQLFYQMVLGKSFNWGAIIKYLTQVSLGALGIGLAFGIASVLWLGFIFNDTVIEIALTLAVSYIAYFTNVVLIRFWHSLTEEDSLWHKVTDKKNDSVPPGWFTL 305
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 40140984 40143903 - Maker00006846 Lcy10g1580 645091
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy10g1580 305 PANTHER SODIUM/HYDROGEN EXCHANGER 23 269 IPR018422 GO:0005886(PANTHER)|GO:0006812(InterPro)|GO:0009941(PANTHER)|GO:0015385(PANTHER)|GO:0015385(InterPro)|GO:0015386(PANTHER)|GO:0016020(InterPro)|GO:0051453(PANTHER)|GO:0071805(PANTHER)|GO:0098719(PANTHER)|GO:1902600(InterPro)
Lcy10g1580 305 Gene3D - 151 203 - -
Lcy10g1580 305 Pfam Sodium/hydrogen exchanger family 37 269 IPR006153 GO:0006812(InterPro)|GO:0015297(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)|GO:1902600(InterPro)
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy10g1580 K14726 - csv:101209966 480.33