Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy10g1628 ATGCTCTTGAAGCCCTTCAACGCCGTCGCCGTCGTCTTCATGCTCGCTTTCGCATTCTTCATCCTCTTCTTCTCTGGCTTCCTCGAATTTCCACCAGCGTTCACTTCCATCGTACCGCCTACCGACGATTTGAATCTCTCAGCAGTTGAGTTTGCATCTGAACCTTTCACTGATTTGATCACCGCCTTCAAGAAATGGGACTCTCAGGTGGGTTGTGATCGGTTCCGGGAGAAAATTGGCGGCGGTTTGGGCAATGGGTCTTCGTCGGCTTCGCTGCAGCAAGTTGGCGGCGATTCTAGTTCGGAATGCGGGGGGCTGAAATTGAATCATGTTTCTGTTTTGGTGAAAGGATGGACTTGGATTCCTGATAATTTAGACAATCTGTATTCGTGTTCTTGTGGATTGAGCTGTCTTTGGACTAAATCTTCTGTTCTTGCCGATAAACCTGACGCCTTGTTCTTCGAGACCAGTACGCCTCCACGGCAGAGGCGGAGGGGAGATCCTCTTCGCATATATATGGATCTTGAGGCTGGTCGGAAGCGCTCGGGTTTTGAGGATCTATTTGTTAGTTATCATGCTGAAGATGATGTTCAGTCAACTTATGCAGGAGCACTCTTTCACAATGGTCGAAACTATCACGTATCTTCTACTAAAAACAATGATACACTTGTTTATTGGTCGTCGTCCCGTTGTCTTCCCCAAAGAAATCAGCTTGCTAAAAAGTTTCTAAGCTTGCTGCCTCACCATTCATTTGGCAAGTGCTTGAACAATGTAGGCGGACTTGACATGGCCCTTTCTATGTATCCAGAATGTGCGAACGATGCCAGTGTCACCCCAAAATGGTGGGATCACTTGCATTGTGCAATGTCTCATTACAAATTCGTTCTTGCAATCGAGAACACGATGACCGAGAGTTACGTGACGGAGAAGCTATTTTATGCGCTAGACTCTGGTTCGGTTCCGATCTACTTTGGTGCCCCTAATGTCTGGGACTTTGTCCCTCCACATTCTATAATTGATGGGTCTAAATTCAGCTCCTTGGAAGAGTTAGCTTCTTATGTAAAGCGACTTGCCAATGATCCTGTAGCTTATGCTGAGTACCATGCTTGGAGACGATGCCGTGCATTGGGTAACTATAGAAGGACCCGAGCTGCAAGCCTCGACACGCTGCCATGCCGGGTGTGTGATGCTGTGAGCAGAAAGGGTGGAAGAAATGCTTGA 1221 47.5 MLLKPFNAVAVVFMLAFAFFILFFSGFLEFPPAFTSIVPPTDDLNLSAVEFASEPFTDLITAFKKWDSQVGCDRFREKIGGGLGNGSSSASLQQVGGDSSSECGGLKLNHVSVLVKGWTWIPDNLDNLYSCSCGLSCLWTKSSVLADKPDALFFETSTPPRQRRRGDPLRIYMDLEAGRKRSGFEDLFVSYHAEDDVQSTYAGALFHNGRNYHVSSTKNNDTLVYWSSSRCLPQRNQLAKKFLSLLPHHSFGKCLNNVGGLDMALSMYPECANDASVTPKWWDHLHCAMSHYKFVLAIENTMTESYVTEKLFYALDSGSVPIYFGAPNVWDFVPPHSIIDGSKFSSLEELASYVKRLANDPVAYAEYHAWRRCRALGNYRRTRAASLDTLPCRVCDAVSRKGGRNA 406
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 40692928 40696958 - Maker00039407 Lcy10g1628 645139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy10g1628 406 FunFam Alpha-(1,4)-fucosyltransferase 170 376 - -
Lcy10g1628 406 PIRSF FucT_plant 1 406 IPR017177 -
Lcy10g1628 406 PANTHER ALPHA- 1,3 -FUCOSYLTRANSFERASE 109 400 IPR001503 GO:0006486(InterPro)|GO:0008417(InterPro)|GO:0016020(InterPro)|GO:0036065(PANTHER)|GO:0046920(PANTHER)
Lcy10g1628 406 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 100 400 - -
Lcy10g1628 406 Pfam Glycosyltransferase family 10 (fucosyltransferase) C-term 219 401 IPR001503 GO:0006486(InterPro)|GO:0008417(InterPro)|GO:0016020(InterPro)
Lcy10g1628 406 Gene3D - 171 379 IPR038577 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy10g1628 K14412 - csv:101216230 764.222