Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lcy10g1694 | ATGGCGTCTTCCTCTTTCTCCGATCACTACCTCCAAGTTTTCTTCTCACTTACGGCCTTCGCGCTCTCTGCATTCATCTTCTTCCTCATCCAAAAACGCACCTCCAAGCCACGCCTCAACCTCCCGCCGGGACCCCGCGGCTGGCCGGTCGTCGGAAACCTCTTCCAGGTCGCCCGCACCGGCAAGCATTTCTTCGAATACATCGAAGACATCCGCCAGATTTACGGCCCGATCTTCACTCTCCAGATGGGCTCTCGCACCATGATCGTCTTGTCCGGCGCTGACCTCATCCACGAAGCCCTAATCAAGCGCGGCCCTGCCTTCGCCAGCCGCCCTGCCGAGAACCCGACCCGAATCGTCTTCAGCAGCAACAAATTCTCTGTCAATGCCGCCGTCTACGGCTCCCTCTGGCGCTCCCTCCGCCGCAACATGGTCGAGAACATGCTCTCTTCCAGCCGCTTGAAGGAATTTCGCGACGTCAGGAAGAAGGCCATGGATAAGCTCGTCCAACGCATCCGAGCCGACGCTGCCGCCAACGGCGGCGCCGTTTGGGTGTTGAAGAACGCTCGGTTCGCTGTGTTCTGCATTCTCTTGGCGATGTGCTTTGGATTAGAAATGGACGAGGAATCGGTTGAGAAAATGGATCAAGTTCTTAAAACCGTTCTGATCACCGTCGATCCGAGAATCGACGATTTTCTCCCGATTTTGAGGCCGTTCTTCTCAAAGCAGAGGAAACGCGCCATGGAAGTGAGAACAGAGCAAATCGAATTCGTCGTACAGTTCATCAATCGCCGCAAAAAAGCACTTCAAAATCCAGGTTCAGACGTTAACGCAACTTCATTTTCATACCTCGATACGCTCTTCGATCTCAAGGTGGACGGTCGGAAATCTTCTCCGACGGACGCGGAACTAGTCACTCTCTGCTCTGAATTCCTCAACGGCGGAACCGACACGACGGCCACCGCCGTCGAATGGGGAATCGCAGAGCTGATCACAAACCCTGACATCCAGAACAAACTACACGAAGAAATCAAACAATTAGTAGGCGACAGAAAAGTAGACGAATCGGATGTTGAGAAATTGCCCTATCTTCAAGCGGTGGTGAAAGAATTGCTGAGAAGGCATCCACCGACGTACTTCACGCTGACACATTCGGCGATCGAGGCGACGAAGCTCGCCGGATACGACATTCCGGTGGAGGCGAGTGTGGAGGTTTACTTGGCCGGAATCAGCAACGATCCGGCACTGTGGAAGAATCCAGAGAAATTCAACCCGGAGAGATTCATGTCCGGCGAGGAAGATACGGATATGACGGGAATCAAAGAACTGAAGATGATTCCGTTCGGAGTTGGAAGAAGAATCTGCCCTGGTTTGGGAATGGCGACGATTCACGTTCATCTGATGCTGGCGAGATTGGTTCAGGAATTTGAATGGAGTTCGTATCCGCCGAACAGTGAATTGGATTTTACGAAGAAGTATGAGTTTACTGTTGTGATGAAGAATTCTCTCAAAGCCATTGCCAGAACCAGAGCTTAG | 1536 | 52.54 | MASSSFSDHYLQVFFSLTAFALSAFIFFLIQKRTSKPRLNLPPGPRGWPVVGNLFQVARTGKHFFEYIEDIRQIYGPIFTLQMGSRTMIVLSGADLIHEALIKRGPAFASRPAENPTRIVFSSNKFSVNAAVYGSLWRSLRRNMVENMLSSSRLKEFRDVRKKAMDKLVQRIRADAAANGGAVWVLKNARFAVFCILLAMCFGLEMDEESVEKMDQVLKTVLITVDPRIDDFLPILRPFFSKQRKRAMEVRTEQIEFVVQFINRRKKALQNPGSDVNATSFSYLDTLFDLKVDGRKSSPTDAELVTLCSEFLNGGTDTTATAVEWGIAELITNPDIQNKLHEEIKQLVGDRKVDESDVEKLPYLQAVVKELLRRHPPTYFTLTHSAIEATKLAGYDIPVEASVEVYLAGISNDPALWKNPEKFNPERFMSGEEDTDMTGIKELKMIPFGVGRRICPGLGMATIHVHLMLARLVQEFEWSSYPPNSELDFTKKYEFTVVMKNSLKAIARTRA | 511 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 10 | 41339040 | 41340575 | - | Maker00039347 | Lcy10g1694 | 645205 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lcy10g1694 | 511 | SUPERFAMILY | Cytochrome P450 | 42 | 510 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy10g1694 | 511 | CDD | CYP77_89 | 74 | 504 | - | - | |
| Lcy10g1694 | 511 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 448 | 457 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Lcy10g1694 | 511 | PANTHER | FLAVONOID 3'-MONOOXYGENASE-RELATED | 24 | 507 | IPR051103 | GO:0016020(PANTHER)|GO:0016709(PANTHER) | |
| Lcy10g1694 | 511 | Pfam | Cytochrome P450 | 42 | 499 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy10g1694 | 511 | PRINTS | E-class P450 group I signature | 303 | 320 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy10g1694 | 511 | PRINTS | E-class P450 group I signature | 323 | 349 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy10g1694 | 511 | PRINTS | E-class P450 group I signature | 72 | 91 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy10g1694 | 511 | PRINTS | E-class P450 group I signature | 455 | 478 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy10g1694 | 511 | PRINTS | E-class P450 group I signature | 406 | 430 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy10g1694 | 511 | PRINTS | E-class P450 group I signature | 445 | 455 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy10g1694 | 511 | PRINTS | E-class P450 group I signature | 365 | 383 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy10g1694 | 511 | PRINTS | E-class P450 group I signature | 96 | 117 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy10g1694 | 511 | PRINTS | E-class P450 group I signature | 192 | 210 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy10g1694 | 511 | PRINTS | P450 superfamily signature | 366 | 377 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy10g1694 | 511 | PRINTS | P450 superfamily signature | 446 | 455 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy10g1694 | 511 | PRINTS | P450 superfamily signature | 455 | 466 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy10g1694 | 511 | PRINTS | P450 superfamily signature | 314 | 331 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy10g1694 | 511 | Gene3D | Cytochrome P450 | 27 | 510 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Lcy10g1694 | 511 | FunFam | Cytochrome P450 family protein | 35 | 511 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Lcy10g1694 | Lcy-Chr10:41339040 | Lcy8g0971 | Lcy-Chr8:34286358 | 2.06E-116 | dispersed | |
| Lcy1g0433 | Lcy-Chr1:3831887 | Lcy10g1694 | Lcy-Chr10:41339040 | 4.58E-153 | transposed | |
| Lcy10g1694 | Lcy-Chr10:41339040 | Lcy7g0590 | Lcy-Chr7:5283200 | 6.40E-252 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lcy10g1694 | K21995 | - | csv:101206763 | 906.36 |