Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy10g1727 ATGGAGGTCACCGGAACCGGCGCCGGAGGAGGAGCAGCAGCAGGAAGCGAGAAACGGCGTCGTCCGATCACAGCAATAGCAACATCCTTCTTCATCGACGTGCTCACCGGACCTTGGTTCATGGTGTTCGCCTCATTTCTAATCATGTCCACCGCCGGAACGCCGTACATGTTCGGCCTCTACTCCGGCGCCATAAAATCCGTCCTCGGCTACGACCAGAGCACTCTGAATCTGATCGGCTTCTTCAAAGACCTAGGCACGAACGTCGGAATACCTTCCGGCCTAATCGCTGAAATCACGCCGCCGTGGGTGGTTCTGGCGATCGGCGCGGGCATGAACTTCTTCGGATACTTCATGATTTGGCTGTCGGTGACGGAGAAGGTGGCGGCGCCGGCGGTGTGGCTGATGTGCCTTTACATTTGCCTGGGGGCGAATTCGACGGCGTTTGCGAACACAGGCGCGCTGGTGACTTGCGTGAAGAATTATCCTGCGAGAAGAGGCGTGGTTCTAGGGATTTTGAAAGGATATATCGGATTGAGCGGTGCAATTTTGACGCAGATTTATCAGGCGATCTACGGCGATGATTCGAAATCGTTGATTCTGCTTATCGCTTGGCTTCCGGCGGTGATTTCCGTCGCGTTCTTGCGGACGATTCGGATTTTGAAGGTGGATCACCAGCCGAATGAACTCAGAGTTTTTTACAGGTTCCTGTACATTTCTCTCGGCCTTGCCGGATTTCTCATGGTGATGATAATCCTTCAGCGAAAATACAATTTCTCCCACATCGAGTACAGTGGCAGCGCCGCCATGGTCGTCTTCCTCCTCTTCTTTCCCCTGTTCGTCGTCATCGCCGAAGACTACAAAATTTGGCAAAAAAAACTTTCACAACTCCAAAATCCTCCTCCTCTCACCGTCATCACCCAAAAACCACCGCCGCCGCCGCCGCAGCGGTTTCAGGCGAACCTCCAAACGCCCGAAAAACCGCCCTCTTCGCCATCCTGCTGGAGAACCGCCCTGAGGCCGCCGCCGAGAGGCGAAGATTTCACGATTCTCCAAGCGCTCTTCAGTGCCGATATGCTCCTCCTCTTCCTCTCCACCGCGTGCGGCGTCGGCGGCACTCTCACCGCCATCGACAACCTCGGCCAAATCGGCGACTCTCTCCGGTACCCTAAACAGAGCATCAGCACATTCGTATCACTTGTAAGCATCTGGAATTACCTAGGGCGCGTAGTTTCGGGTTTCGCCTCTGAAATCGTCCTCACCAAATACAAATTCCCTCGAACCCTAATTCTCACCCTGATCCTCCTCCTCTCCTGCGCCGGCCACCTCCTCATCGCCTTCAATCCCGCCGGCGGCCTCTACGTCGCCTCAATCATAATCGGATTCTGCTACGGCGCCCAGTGGCCGATCCTGTTCGCCATAATTTCCGAGATCTTCGGCCTCAAATACTACTCGACGCTCTACAATTTCGGATCCGTTGCGAGTCCAATCGGGCTGTATTTCCTCGACGTTCGGGTCGCCGGACATTTGTACGACAAGGAGGCCGAGCGGCAGCTGGCGGCGGCGGGGAGGAGGAGGATTGCCGGAGAATCGTTGAACTGCGAGGGCGTGGATTGCTTTAAACTGTCGTTCATCATAATCACTGGAGTTACTTTGATCGGGGCTCTGTTTTCGTTCGTTCTGGTGATTCGAACCAGAGCTTTTTATAAGACCGATATTTACAGGAAGTTTAGGGATGAAGATGAAGAAGAAGACGCAGAGCTGAGTGAAATGGTAGCTGGAAACAGCGTCGTTTCGAATGATCAGAGAAATGGGGAGAGGAAATAA 1827 54.02 MEVTGTGAGGGAAAGSEKRRRPITAIATSFFIDVLTGPWFMVFASFLIMSTAGTPYMFGLYSGAIKSVLGYDQSTLNLIGFFKDLGTNVGIPSGLIAEITPPWVVLAIGAGMNFFGYFMIWLSVTEKVAAPAVWLMCLYICLGANSTAFANTGALVTCVKNYPARRGVVLGILKGYIGLSGAILTQIYQAIYGDDSKSLILLIAWLPAVISVAFLRTIRILKVDHQPNELRVFYRFLYISLGLAGFLMVMIILQRKYNFSHIEYSGSAAMVVFLLFFPLFVVIAEDYKIWQKKLSQLQNPPPLTVITQKPPPPPPQRFQANLQTPEKPPSSPSCWRTALRPPPRGEDFTILQALFSADMLLLFLSTACGVGGTLTAIDNLGQIGDSLRYPKQSISTFVSLVSIWNYLGRVVSGFASEIVLTKYKFPRTLILTLILLLSCAGHLLIAFNPAGGLYVASIIIGFCYGAQWPILFAIISEIFGLKYYSTLYNFGSVASPIGLYFLDVRVAGHLYDKEAERQLAAAGRRRIAGESLNCEGVDCFKLSFIIITGVTLIGALFSFVLVIRTRAFYKTDIYRKFRDEDEEEDAELSEMVAGNSVVSNDQRNGERK 608
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 41647606 41653137 - Maker00039438 Lcy10g1727 645238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy10g1727 608 SUPERFAMILY MFS general substrate transporter 38 568 IPR036259 -
Lcy10g1727 608 Pfam Nodulin-like 38 283 IPR010658 -
Lcy10g1727 608 Gene3D MFS general substrate transporter like domains 351 570 IPR036259 -
Lcy10g1727 608 CDD MFS_Mch1p_like 37 555 - -
Lcy10g1727 608 MobiDBLite consensus disorder prediction 587 608 - -
Lcy10g1727 608 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 38 578 - GO:0016020(PANTHER)
Lcy10g1727 608 MobiDBLite consensus disorder prediction 304 319 - -
Lcy10g1727 608 MobiDBLite consensus disorder prediction 301 335 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy10g1727 Lcy-Chr10:41647606 Lcy7g0626 Lcy-Chr7:5718486 8.05E-267 dispersed
Lcy10g1727 Lcy-Chr10:41647606 Lcy5g0317 Lcy-Chr5:3031968 3.35E-241 wgd
Lcy10g1727 Lcy-Chr10:41647606 Lcy7g0623 Lcy-Chr7:5689805 2.24E-268 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy10g1727 - - - 0.0