Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lcy10g1836 | ATGCATCATCCTCTTCTTGAATCCCACTACCATGCTAGGCACGACTATGACAGTGGGACAATGACTTTAAGTATCATCCTTCACAACCATGGACGTCCATGTAATACCAACAATGACGGCCGTGCTCCAGTCCGCTTTCTTGATTCTCTATTCTCGTCTCCAAACAACCCCCTCATTCAACTGCGGTTCGGCGGGAGGATGGAATTTGCCGACGAGCTCGCGGCCGGAGCCACCGCCTCCAATTCCAACCGCCACAAGCCCTCCGATACCAGAGACGGCGGCGACCTCTCGTCCTCCGACAATGACACCGAAGATGCACATCCTGTTTTCTCTAACATGCCTGCTTCACTCGCACCACCAGTATCTCCCATTCTTCCTCTGCAAAATAGATGTAATGTAGCAATTCAGGCTGTTAAGGATACCCGAATGCCTGCGTATGTGTGGCAAGTATTACAAATTCAAGTGTGCATGGGACTGTCTTCAGTTTCACCTCTGTCTTGTTGTGACCTTGCACCCCATTTTTTCTTGGAGAATGAATTTGCTGCTAAACCTGGTACTCCTGCATGGGATGCTTCCAGAGAGCCCCAATATATGGATGATAAATTGGAGACAATACAAAATATATGTCAGAAAATTGTGGACACCACAAACTTGTACTCATTTTCTAAATTGGATGACCAGCAAGTATATTCTCTTATGAGGCTGAGGGAAATTTCTCATCGAGTTATTAATGACCGAGATCCAAGGGTGACAAAAAATGATGTGATTAGTGCTATGTGCTTTTACATTAACAGGATGGCAGGTAAGTGCAAGGATATTGTTGACATTTTGAATAGGATGTCATATAAAGACTTAGATGACCAGCAAGTGCAACAGTTTTTGAGATTGAAAGAGCTTCTATGTGGGATTGTTGATGGAGCTAAAGATGTGGAAACTGAAACTTCTCATATTGTTGAACAGGGCGTAGCAAATGATATGTGGATGACAGAGAGTCTGGAGGTTGAGCCAATTGACTCCAGCAATGATGATGTACTGCTTGGAGAGAGACAAATTATAATGGTTGAAGATGAACAGGCAGTGGCTGAAGCTAGGCTCGAGAATCAATATTGTGACCTGTCACATGTTAAGCACACTATTAGTTGGCCACCAAATGGTAGCTTAACCTTAGAGTGGGTGGTAGAGATGATGACAACACTTGAACAATCTTCAAGAACCTACTCGCCTGCAGAGTTTCAACTTGTCATGCCAGTTTCTGTGGTAGATGCAATACTAGATGTAGCTGCAAGTATCCTTCACAAGGACCCAAACTGTGTGGAAATTGACTGCCATGGAGAAGTTTCCAAAGTCGTTATAGTTGGGGACATTCATGGTCATTATCATGACTTACTTCATCTCTTTGAACTTGCTAACTTACCATCTAAGAGCCAGTGTTATGTTTTTAATGGTAATTACGTGGATAGAGGAGCATGGGGACTGGAAGTGTTTTTGGTCTTGTTGGCATGGAAGATCTTGATGCCTGATAGAGTATGTCTACTCCGTGGAAATCATGAAACAAGAATTTGTACATCATCCTTCGGTTTTGAGAAAGAAGTAAGGACAAAATATGGCGAGCAAGGTGAAAAAGTATATCACAGGTGCTTGGAAACATTTAAGGAACTTCCTTTGGCTGCAATTATTGCTGGAAAAGTATATACAACCCATGGAGGGTTATTTCGTAAGCCATGCAATCCTGATGTGCAGAATTACAAGGAAAGGAAGACACATGAGCTGGAGATTGGATCCTTACAAGACTTATCTAAGCTCGAAAGGTTTTTTGTTGATATTCCAACTAAAGATGAAGATCCAAATATAATTTTGGCAGATGTATTGTGGTCTGATCCTTCTAAAGTAGATGGTTTAAGAAAAAACCAAGCCAGAGGAGCAGGTTTATTATGGGGTCCTGATTCTACGGAAGCATTCTTAAAGCTGTCCAATTTAAAGTTGATCATTAGATCACATGAAGGTCCAGATTCAAGGGACGGTAAAATTGATTTTGATGATATGATAATGGGTTATAGCGCAGACCATGACAGAGAATCAGGGAAATTATATACTCTATTTAGCGCTCCAGATTTCCCACAGTTTGGTCAGAAGAGCTACAATAATGAGGGAGCATATGCTACTTTGAAGCATCCGGATTTTGAAACTCCATCCTTCCATACATTTAAAGCGATAGATAAACCGAAGGTAGACGTTTGCTATTTTGGTTGTGAAGGACATGATGTTGACTTAGACTTGACATTAATGGCTCTGGCTGATGCCGTCTCTTCTAAAAACTCTAGTCCTATTGAGATTCATTCTGGGGTTGATTTTGAGGCATTAGGAATATTAAACCCACCTTCTTGGAGCATTACATTGACAGATGATGCTACAGGTACCCAGAATGTTCAAATTCCGAAAGCTCCCGTGGTAGAAGGGCTGCCTTTGCCGCCAAGCATAGAGGAGCCTCATAAGGCTGCATATGAGTACTTCCTGGAGCTCATTGCAGGATTGAAATTTATGCTTCAAACAGCGGTTCGGTGCCCAAAGTTTAGTGATCTTCCTTGTTGTAATGTCAAAGGACAACGTTGCGAAGATCGAGATGAGATTTTTCCTTTCAACGACACATCCCAAGTTCCCAACGCAATTCTTGATGCCCATCGGAAGTTACCCTGGACGCGTGAAATGGGAAAACCTTTGTCTAGGAGCATTTCCCCTCAATATGAGCTGATGAAGGCTATATTGTCGATCAGAAGAAGCTAG | 2781 | 42.43 | MHHPLLESHYHARHDYDSGTMTLSIILHNHGRPCNTNNDGRAPVRFLDSLFSSPNNPLIQLRFGGRMEFADELAAGATASNSNRHKPSDTRDGGDLSSSDNDTEDAHPVFSNMPASLAPPVSPILPLQNRCNVAIQAVKDTRMPAYVWQVLQIQVCMGLSSVSPLSCCDLAPHFFLENEFAAKPGTPAWDASREPQYMDDKLETIQNICQKIVDTTNLYSFSKLDDQQVYSLMRLREISHRVINDRDPRVTKNDVISAMCFYINRMAGKCKDIVDILNRMSYKDLDDQQVQQFLRLKELLCGIVDGAKDVETETSHIVEQGVANDMWMTESLEVEPIDSSNDDVLLGERQIIMVEDEQAVAEARLENQYCDLSHVKHTISWPPNGSLTLEWVVEMMTTLEQSSRTYSPAEFQLVMPVSVVDAILDVAASILHKDPNCVEIDCHGEVSKVVIVGDIHGHYHDLLHLFELANLPSKSQCYVFNGNYVDRGAWGLEVFLVLLAWKILMPDRVCLLRGNHETRICTSSFGFEKEVRTKYGEQGEKVYHRCLETFKELPLAAIIAGKVYTTHGGLFRKPCNPDVQNYKERKTHELEIGSLQDLSKLERFFVDIPTKDEDPNIILADVLWSDPSKVDGLRKNQARGAGLLWGPDSTEAFLKLSNLKLIIRSHEGPDSRDGKIDFDDMIMGYSADHDRESGKLYTLFSAPDFPQFGQKSYNNEGAYATLKHPDFETPSFHTFKAIDKPKVDVCYFGCEGHDVDLDLTLMALADAVSSKNSSPIEIHSGVDFEALGILNPPSWSITLTDDATGTQNVQIPKAPVVEGLPLPPSIEEPHKAAYEYFLELIAGLKFMLQTAVRCPKFSDLPCCNVKGQRCEDRDEIFPFNDTSQVPNAILDAHRKLPWTREMGKPLSRSISPQYELMKAILSIRRS | 926 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 42667000 | 42677174 | - | Maker00039637 | Lcy10g1836 | 645347 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lcy10g1836 | 926 | PRINTS | Serine/threonine phosphatase family signature | 601 | 628 | IPR006186 | GO:0016787(InterPro) | |
Lcy10g1836 | 926 | PRINTS | Serine/threonine phosphatase family signature | 511 | 535 | IPR006186 | GO:0016787(InterPro) | |
Lcy10g1836 | 926 | PRINTS | Serine/threonine phosphatase family signature | 478 | 505 | IPR006186 | GO:0016787(InterPro) | |
Lcy10g1836 | 926 | PRINTS | Serine/threonine phosphatase family signature | 548 | 574 | IPR006186 | GO:0016787(InterPro) | |
Lcy10g1836 | 926 | PRINTS | Serine/threonine phosphatase family signature | 448 | 475 | IPR006186 | GO:0016787(InterPro) | |
Lcy10g1836 | 926 | PRINTS | Serine/threonine phosphatase family signature | 695 | 711 | IPR006186 | GO:0016787(InterPro) | |
Lcy10g1836 | 926 | Gene3D | - | 350 | 751 | IPR029052 | - | |
Lcy10g1836 | 926 | ProSitePatterns | Serine/threonine specific protein phosphatases signature. | 512 | 517 | IPR006186 | GO:0016787(InterPro) | |
Lcy10g1836 | 926 | SUPERFAMILY | Metallo-dependent phosphatases | 397 | 743 | IPR029052 | - | |
Lcy10g1836 | 926 | PANTHER | SERINE/THREONINE-PROTEIN PHOSPHATASE 5-RELATED | 204 | 746 | IPR051134 | - | |
Lcy10g1836 | 926 | Pfam | Calcineurin-like phosphoesterase | 448 | 667 | IPR004843 | GO:0016787(InterPro) | |
Lcy10g1836 | 926 | MobiDBLite | consensus disorder prediction | 76 | 113 | - | - | |
Lcy10g1836 | 926 | SMART | pp2a_7 | 415 | 739 | IPR006186 | GO:0016787(InterPro) | |
Lcy10g1836 | 926 | MobiDBLite | consensus disorder prediction | 85 | 102 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lcy10g1836 | Lcy-Chr10:42667000 | Lcy6g2371 | Lcy-Chr6:48479526 | 6.86E-117 | dispersed | |
Lcy10g1830 | Lcy-Chr10:42616616 | Lcy10g1836 | Lcy-Chr10:42667000 | 2.41E-08 | proximal |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lcy10g1836 | K04460 | - | csv:101211172 | 1258.82 |