Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy10g1948 ATGGCTGAAGATGGACAGGAGATGAGATCTCTGGCTTTGACGCCCACTTGGTCTGTTGCTTCTGTGCTGACTATTTTTGTTGCAGTCTCTTTGCTTGTCGAGCGGTCCATTCACCGGCTAAGCACTTGGTTGGGGAAAACTAACAGAAAGCCATTATTTGAGGCAGTGGAGAAAATGAAAGAAGAGTTGATGCTGCTTGGATTTATTTCTCTCCTATTAACGGCTACATCAAGCTCAATAGCAAATATCTGCATCCCATCAAAGTTCTACAATACCCCTTTTACTCCATGCACCAAATCTGAGATTGATGAACTAAAAGAAGACAGTTCATCTGAGGAACGGAAACTGTATACAGGTTATGAGCCGTTTGTTTCATATGAGGGTCTTGAGCAACTGCATCGCTTTATCTTTATAATGGCAGTAACTCACATATCTTATAGCTGCTTAACAATGTTACTGGCAATTGTGAAGATTCACAGATGGAGAGTCTGGGAAGATGAAGCCCACATGGACAGACATGATTCACTAAATGTGATGAGCTACATCCAGAAGGATTTGATGATGAAATCAATGGAAGAATTGGATAATGATGAAAGTGAACTTTTTCAATTTTTCTGTACAATGACATGTTTCTTCCGGCAATTTGGGAATTCTGTAGTTCGTGCCGACTATCTCACACTCCGTAAGGGCTTCATCATGAATCACCACCTCCCTTTGACATATGATTTCCACAGCTACATGATTCGCTCCATGGAAGAAGAATTCCAAAGGATAGTTGGTGTGAGTGGCCCACTGTGGGGATTCGTTGTTGCTTTCATGCTGTTTAATGTAAAAGGCTCTAATCTGTATTTCTGGATAGCAAGCATTCCGATTACTCTTGTTCTTTTTGTGGGCACGAAGCTGCAGCATGTCATTGCAACATTGGCATTAGAAAGTGCTGGTATAACTGGTTCTTTTTCGGGTTCGAAGCTAAAGCCAAGAGATGATCTTTTTTGGTTTAAGAAGCCTGAATTCCTCTTGTCCTTGATCCACTTTATCCTTTTCCAGAATGCATTCGAGTTGGCATCGTTCTTCTGGTTCTGGTGGCAATTCGGATATAATTCTTGCTTTATTAGGAATCATATGCTTGTCTATGCAAGACTCATATTGGGATTTGCAGGGCAGTTCCTTTGCAGCTACAGCACTTTGCCCTTGTATGCTTTGGTAACTCAGATGGGAACAAACTATAAAGCTGCATTAATTCCACAAAGAATAAGGGAAACAATCCATGGATGGGGCAAGGCAGCAAGAAGGAAAAGAAGGCTTCGTATGTTCACTGACGACACCACGATTCACACCGAAACAAGCACAGTGATGTCACTTGAGGATGATGACCATCGGCTTATTGATGATACTCCTGAAATTACTTCTGGCTATACGGCAATCGAGCTCCAGCCAACTGTACAAGACGAATCTGACTCTGTCGCTAATGAACGGCCAAGCAGGGCCAGAATGCCTCTTCTACAACCCTCTGCATCTCTTTCTTCACCAGTTGATCATAAGTTTGAGAGTCATGCTGTGCCTCGACCTTCACGTTGCTTCTCACACAGCCACAAGATGGGCACGGTCCCTGCCATGGGCACTGGCAACCCGAGCCACTGCAGCATCTGTTGCCCGGATTCTGCACACACCCACATCCATTTTGCACACAGGGAGGGTTGCAGTATTCGCCATTGCTGCAGCAGTGCTCGCAATTACAGCAGTCCTGTGAATAAGGCAGACGTTGGCCTACGATCTCACTCTGCGCAACGGAGCTATGGATGGATGGTTTGTGTGTGTTTGAAAAGTGAAGGTCAGCCATGGCTTTTTATATGGGGGAGAGTTGGTGGGGTTGTGAGAAAAGAGGCAGCTTTTGATGGAGATGAAAATGCAGAGGCAACAAGAGTGTTGTGTGGATTTGTTCTTGGAATTAGGAGGCCATCATTGTGTGAAGTCTTCTGTGCTGCGATTGAATCGCAGATGACACCAATGTTAAAGAAGATGGGAGTGAAACTCATTTCTTTTTATTTTTAG 2052 43.96 MAEDGQEMRSLALTPTWSVASVLTIFVAVSLLVERSIHRLSTWLGKTNRKPLFEAVEKMKEELMLLGFISLLLTATSSSIANICIPSKFYNTPFTPCTKSEIDELKEDSSSEERKLYTGYEPFVSYEGLEQLHRFIFIMAVTHISYSCLTMLLAIVKIHRWRVWEDEAHMDRHDSLNVMSYIQKDLMMKSMEELDNDESELFQFFCTMTCFFRQFGNSVVRADYLTLRKGFIMNHHLPLTYDFHSYMIRSMEEEFQRIVGVSGPLWGFVVAFMLFNVKGSNLYFWIASIPITLVLFVGTKLQHVIATLALESAGITGSFSGSKLKPRDDLFWFKKPEFLLSLIHFILFQNAFELASFFWFWWQFGYNSCFIRNHMLVYARLILGFAGQFLCSYSTLPLYALVTQMGTNYKAALIPQRIRETIHGWGKAARRKRRLRMFTDDTTIHTETSTVMSLEDDDHRLIDDTPEITSGYTAIELQPTVQDESDSVANERPSRARMPLLQPSASLSSPVDHKFESHAVPRPSRCFSHSHKMGTVPAMGTGNPSHCSICCPDSAHTHIHFAHREGCSIRHCCSSARNYSSPVNKADVGLRSHSAQRSYGWMVCVCLKSEGQPWLFIWGRVGGVVRKEAAFDGDENAEATRVLCGFVLGIRRPSLCEVFCAAIESQMTPMLKKMGVKLISFYF 683
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 43531013 43539567 - Maker00039454 Lcy10g1948 645459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy10g1948 683 PANTHER MLO-LIKE PROTEIN 1 1 474 IPR004326 GO:0006952(InterPro)|GO:0016020(InterPro)
Lcy10g1948 683 Pfam Mlo family 9 446 IPR004326 GO:0006952(InterPro)|GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy10g1948 Lcy-Chr10:43531013 Lcy9g1288 Lcy-Chr9:37572574 1.53E-161 dispersed
Lcy10g1948 Lcy-Chr10:43531013 Lcy11g0297 Lcy-Chr11:4760616 2.00E-83 transposed
Lcy10g1948 Lcy-Chr10:43531013 Lcy6g2364 Lcy-Chr6:48434105 2.90E-83 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy10g1948 K08472 - csv:101217434 873.618