Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lcy10g2070 | ATGAATGCGAATAGTTCTCGATTTCAATCGTTTGGTCAGACTGAGATTAACTGGGACAAGCTTGATAAAGCAAAATTTTATGGCGTAGGAGCTGGTCTCTTTACTGGGATTACAGTTGCACTGTACCCTGTTTCTGTTGTAAAAACAAGGATGCAGGTTGCTGTGAAGGATTCTGCCGAGAAAAATGCATTATCTGTTGTTAAAGGCTTACTGAAGAATGATGGGGTTCCTGGTCTTTACAGAGGGTTCGGCACAGTAATAACCGGTGCAATTCCTGCGAGGATTATATTTCTTACCGCTTTGGAGACGACCAAAGTGGGAGCCTTTAAAATGGTTGAGCCATTTAAATTTTCTGAACCTACCCAGGCTGCAATAGCTAATGGATTAGCTGGCATGACTGCATCACTTTTTTCTCAAGCTGTTTTCGTTCCAATTGATGTGATTAGTCAAAAGCTAATGGTTCAAGGATACTCGGGCAATACAAGATATAATGGTGGTTTAGACGTTGCTCGTAAACTGATAAAGGCTAATGGGATCAGGGGATTGTACAAAGGTTTTGGGTTATCTGTTATGACATACTCTCCATCTAGTGCTGTATGGTGGGCAAGTTATGGTGCAAGTCAACGCGTCATCTGGAGGTTCTTAGGCCAGAACTCTGCTTCTGAGAAATTTGCTCCTAGCCATGCGCAACTTATTTCAGTTCAGGCTGCGGGTGGGATAATTGCAGGTGCAACAGCTTCCTGCATTACAACACCATTGGACACTATAAAGACTCGCTTACAGGTGATGGGTGATAAAGGGAAGACAGCAAGACAAATTGTTGAAAGCTTAATTGCTGAGGATGGATGGAAAGGTTTTTACAGGGGGTTGGGTCCTCGATTTTTCAGCATGTCAGCCTGGGGAACCTCGATGATATTGGCTTACGAGTACTTGAGTATGGACTTCTCACAAAATATAGCCTGCACTCTATTCAGCGCTTGTGTGCAAAAGATGTGCAGACTTGACCTCAGCGACGATTTTAGAGCCGAAGCTCGTCTGGTTTCAACTCTTTTTTTCCCCTCACAGTCACAAGGGCAGGTTCAGGTTCAGTCAGGTTCAGCATAG | 1104 | 43.84 | MNANSSRFQSFGQTEINWDKLDKAKFYGVGAGLFTGITVALYPVSVVKTRMQVAVKDSAEKNALSVVKGLLKNDGVPGLYRGFGTVITGAIPARIIFLTALETTKVGAFKMVEPFKFSEPTQAAIANGLAGMTASLFSQAVFVPIDVISQKLMVQGYSGNTRYNGGLDVARKLIKANGIRGLYKGFGLSVMTYSPSSAVWWASYGASQRVIWRFLGQNSASEKFAPSHAQLISVQAAGGIIAGATASCITTPLDTIKTRLQVMGDKGKTARQIVESLIAEDGWKGFYRGLGPRFFSMSAWGTSMILAYEYLSMDFSQNIACTLFSACVQKMCRLDLSDDFRAEARLVSTLFFPSQSQGQVQVQSGSA | 367 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
10 | 44769764 | 44774324 | - | Maker00039839 | Lcy10g2070 | 645581 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lcy10g2070 | 367 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 19 | 107 | IPR018108 | - | |
Lcy10g2070 | 367 | SUPERFAMILY | Mitochondrial carrier | 19 | 311 | IPR023395 | - | |
Lcy10g2070 | 367 | Gene3D | Mitochondrial carrier domain | 26 | 321 | IPR023395 | - | |
Lcy10g2070 | 367 | FunFam | Mitochondrial substrate carrier family protein | 27 | 317 | - | - | |
Lcy10g2070 | 367 | PRINTS | Mitochondrial carrier protein signature | 239 | 261 | IPR002067 | GO:0055085(InterPro) | |
Lcy10g2070 | 367 | PRINTS | Mitochondrial carrier protein signature | 39 | 53 | IPR002067 | GO:0055085(InterPro) | |
Lcy10g2070 | 367 | PRINTS | Mitochondrial carrier protein signature | 183 | 201 | IPR002067 | GO:0055085(InterPro) | |
Lcy10g2070 | 367 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 122 | 210 | IPR018108 | - | |
Lcy10g2070 | 367 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 230 | 314 | IPR018108 | - | |
Lcy10g2070 | 367 | PANTHER | MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J | 10 | 312 | - | - | |
Lcy10g2070 | 367 | Pfam | Mitochondrial carrier protein | 124 | 211 | IPR018108 | - | |
Lcy10g2070 | 367 | Pfam | Mitochondrial carrier protein | 31 | 106 | IPR018108 | - | |
Lcy10g2070 | 367 | Pfam | Mitochondrial carrier protein | 235 | 312 | IPR018108 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Lcy10g2070 | Lcy-Chr10:44769764 | Lcy11g1313 | Lcy-Chr11:36633564 | 2.46E-97 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lcy10g2070 | K15121 | - | csv:101206140 | 593.578 |