Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lcy10g2071 ATGGCCTGGAACCCAGATGGTTATGTGGCTGTTGTCAAAATCTACAATTTCCAGCAATATCGTCACATTCAAGCCCCGGGTTGGTCGCTGAGATGGACGTGGGCAAAAAAGGAGGTAATATGGAGCATGGTGGGAGGCCAAGCCACAGAGCAAGGAGATTGTTCAAGATACAAAGCAAACATCCCACATTGCTGCAAGAAAGATCCAACGGTGGTTGATCTGCTACCAGCAACTCCTTACAATTCACAGGTTGCAAATTGTTGTAAAGGTGGAGTACTTACCTCTTGGGTCCAAGATCCTGGAAATGCAATGAGCTCATTTCAGCTGAGTGTTGGTTCAGCTGGAACCAGCAATAGGACTGTCAGAATGCCTAAGAACTTCATTTTGAAAGCACCAGGGCCCGGCTATACGTGTGGACCTGCTACGGTCGTTGAACCAAGTACCTTTATTTCAGCAGATAAGAGAAGGGTCACTCAGGCTTCGAGTAAGTAG 492 47.15 MAWNPDGYVAVVKIYNFQQYRHIQAPGWSLRWTWAKKEVIWSMVGGQATEQGDCSRYKANIPHCCKKDPTVVDLLPATPYNSQVANCCKGGVLTSWVQDPGNAMSSFQLSVGSAGTSNRTVRMPKNFILKAPGPGYTCGPATVVEPSTFISADKRRVTQASSK 163
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
10 44773898 44778536 + Maker00039495 Lcy10g2071 645582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lcy10g2071 163 Pfam COBRA-like protein 8 161 IPR006918 GO:0010215(InterPro)|GO:0016020(InterPro)
Lcy10g2071 163 PANTHER PROTEIN COBRA 1 161 IPR006918 GO:0010215(InterPro)|GO:0016020(InterPro)|GO:0046658(PANTHER)|GO:0052324(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Lcy10g2071 Lcy-Chr10:44773898 Lcy3g0307 Lcy-Chr3:9754620 1.00E-101 dispersed
Lcy10g2071 Lcy-Chr10:44773898 Lcy5g2474 Lcy-Chr5:47482896 6.38E-72 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lcy10g2071 - - - 0.0